Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq28 136 6e-26 seq14 86.0 9e-11 >seq28 Length=374213 Score = 136 bits (150), Expect = 6e-26 Identities = 386/581 (66%), Gaps = 29/581 (5%) Strand=Plus/Plus Query 1455749 GTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTC 1455808 ||| |||||||||||| ||||| ||| ||| || |||| || ||||||||||| Sbjct 39329 GTCTTGTTCCCCATCCAGTACCACGAGATCTGGCAATCGTAC-AAGCGTGCCGAGGCCTC 39387 Query 1455809 CTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGC---- 1455864 ||| ||||| |||||||| ||||| | | |||| ||||| | || | Sbjct 39388 CTTCTGGACTGCCGAGGAAATCGACTTGTCCAAGGACA---TCCAC-GACTGGAACAACA 39443 Query 1455865 ---TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGC 1455921 ||| ||| |||| | |||||| || || ||||| || ||||||| | Sbjct 39444 GAATGAACGAAAACGAAAGATTCTTCATCTCCAGAGTGCTTGCCTTCTT-CGCCGCCTCC 39502 Query 1455922 GATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAG 1455981 || || ||||| ||| ||| ||| || ||| | |||||||| | || ||| Sbjct 39503 GACGGTATCGTCAACGAAAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAG 39562 Query 1455982 GCACGTTTGTTT-TACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTC 1456040 || | |||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct 39563 GC-CAAGAGTTTCTACGGGTTCCAGATCGCGATCGAGAACATCCACTCCGAAACCTACTC 39621 Query 1456041 GCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCAT 1456100 | |||||||||||||| |||||||||| || | || | | || |||||| Sbjct 39622 CTTGTTGATCGACACCTACATCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCAT 39681 Query 1456101 CGACACGGTGCC----GTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACA 1456156 |||||| | || || | ||| |||||||| ||||| | | ||||| | Sbjct 39682 CGACACCATCCCAGAAATCTGCGAG----AAGGCCGAATGGGCCCTTAGATGGAT---CC 39734 Query 1456157 AGGAGGGC-CTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCT 1456214 |||| | | | | || | || | || |||| || ||| | |||| || ||| Sbjct 39735 AGGACGCCGATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCT 39794 Query 1456215 TTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTC 1456274 | ||||| || ||| | ||||||| ||| | ||||| | || | ||||||||| Sbjct 39795 TCTTCTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGT- 39853 Query 1456275 TTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAGTTTT 1456315 || ||| ||||||| | ||| | | ||||||| ||| Sbjct 39854 TTGACCTTCTCCAACGAACTGATCTGCAGAGACGAAGGTTT 39894 >seq14 Length=143611 Score = 86.0 bits (94), Expect = 9e-11 Identities = 173/257 (67%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 ||||| || ||||||||||| ||||| | ||| || | || || || || ||| | | | Sbjct 8300 CCCACTCTATTTAATGCCGGTACGCCACACCCTCAAATGTCTTCTTGTTTCCTGATTGCC 8241 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || ||||| || || || ||||| | || |||| || | || ||| Sbjct 8240 ATGAAGGACGACTCCATCGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCC 8181 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| | || || || | ||| || |||| | || || | ||| | || | Sbjct 8180 AAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATATT 8121 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || || |||||||| || || || | | |||||| | || || || || |||| Sbjct 8120 GCAGGTACCAACGGTACTTCAAATGGGTTGATTCCCATGATCCGTGTATTCAATAACACT 8061 Query 260165 GCGCGCTACGTCGACCA 260181 || || ||||| ||||| Sbjct 8060 GCACGTTACGTGGACCA 8044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177805895148910