Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 194 2e-44 seq14 158 1e-33 seq2 82.4 9e-11 >seq4 Length=235297 Score = 194 bits (214), Expect = 2e-44 Identities = 889/1387 (64%), Gaps = 46/1387 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| || | ||||| | || ||| | |||||||| || || ||||||| | | Sbjct 177331 CCACAACACTTAATCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCT 177390 Query 104282 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | || || || || |||||||| || || || | |||||| | ||||| | || Sbjct 177391 CTAGAAACCTATAACTTGATGTCCCTAAAATACTTT-ACTCACGCCTCTCCAACTTTATT 177449 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| ||||||||||||| || ||||||||| || ||||| | || | ||||| || Sbjct 177450 CAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGA 177509 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 || || | |||||||| | ||| | | ||| ||||| || || || ||||| Sbjct 177510 TTCCATTGAAGGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGG 177569 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 |||||||| | || || || | | | || | ||| ||| || || || Sbjct 177570 TGGTATTGGTCTACATATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAA 177629 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 || || | || | ||||| ||| | || || || ||| ||| || || ||||| Sbjct 177630 CGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGT 177689 Query 104581 AAATCAAGCTGGGCGTCGAAAGGGATCTATCGCAGT----CTATCTT--GAGCCATGGCA 104634 | || | ||| | ||| || || || | |||| || ||||||||||| Sbjct 177690 TGACCAGGGTGG---TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCA 177746 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 ||| |||||| | || ||| | || | | || || ||| | || || || || Sbjct 177747 CGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TG 177805 Query 104695 CC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | | ||| | ||| | ||||| ||| |||| ||||| ||||||||| | || || || | Sbjct 177806 CGAGAGATTTATTCCCAGCTCTATGGGTTCCCGATCTTTTCATGAAGCGTGTCGAAGAAA 177865 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAA-GGCACCTGGTCTCTCCGATGCCGTGGGT 104812 |||| |||| || | || | ||| ||| ||| || || | || | ||| Sbjct 177866 ACGGCACTTGGACTTTATTCTCTCCT-ACATCGGCTCCAGGCTTAAGTGACTGCTACGGT 177924 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 || || ||||||||||| || || ||||| ||||||| || | | ||| | Sbjct 177925 GACGAATTTGAAGCCCTATATACCCGTTACGAAAAAGAAGGCCGTGGTAA---GACTAT- 177980 Query 104873 CCAGCTGCCGATG---TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | || ||| | ||||| | |||| | | | ||||| || ||||||||||| Sbjct 177981 CAAG--GCCCAAAAATTGTGGTACTCTATATTGGAAGCACAAACGGAAACTGGTACACCC 178038 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | | ||||||| || || |||||| || || |||||||| |||||||| ||| Sbjct 178039 TTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTATC 178098 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 ||| || || | || ||||| | |||| | | ||||||||| ||||| Sbjct 178099 AAGTCGTCTAACTTGTGCTGTGAAATTGTTGAATACTCCGCTCCAGATGAGACTGCTGTT 178158 Query 105050 TGTAACCTCGCATCAATCGCTCTCCC--CAAGTATGTGGATCC-----AGA-GACAAAG- 105100 |||||| | || || | ||| | || || ||| || | | ||| | |||| Sbjct 178159 TGTAACTTGGCTTCTGTTGCTTTGCCAGCATTTAT-TGAAACATCTGAAGACGGCAAAAC 178217 Query 105101 ----ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156 |||| | | | |||| || || ||| || | ||| | |||| ||| |||| Sbjct 178218 TTCTACATATAACTTCAAAAAGCTACATGAAATTTCTAAAGTTATCACTCGTAACTTAAA 178277 Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216 || |||||||| | || | ||| || || ||| || | | ||||||||||||||| Sbjct 178278 CAACGTTATTGACCGTAACTATTATCCTGTCGAGGAAGCAAGAAGATCTAATATGAGACA 178337 Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCC---A 105273 | | || |||| | | ||||| || ||| | || || ||||| |||| || | Sbjct 178338 CAGGCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACACTTTCATG--TTGTTGCGTTTA 178395 Query 105274 CGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCA 105333 | |||| || ||||| ||||| | | ||| | || ||||| |||||||| || Sbjct 178396 C-CATTCGACTCCGAAGAAGCACGCTTACTAAATATACAAATCTTTGAAACCATGTACCA 178454 Query 105334 CGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 105393 || | | || || || ||| | || | ||||| ||||| |||||||| | Sbjct 178455 TGCTTCCATGGAAGCCTCTTGTGAGCTAGCTCAAAGAGATGGCCCATACGAAACCTTCCA 178514 Query 105394 GGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT 105453 || ||||||||||| ||||| | |||||||| || |||||||| | | | | Sbjct 178515 AGGCTCTCCAGCTTCTCAAGGTATACTTCAATTCGACATGTGGGACGAAAAACCTTACGG 178574 Query 105454 TCACTACGACTGGGAAGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTC 105512 | | || ||||| || | || || | ||||| | || | ||| || | ||| | Sbjct 178575 TATGTGGGATTGGGATACT-TTGAGAAATGACATCATGAAGCATGGTGTTAGAAACTCTT 178633 Query 105513 TCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 105572 | |||||| || ||||| || || ||||| | || || || ||| | || || || | Sbjct 178634 TGACCATGGCACCTATGCCTACTGCATCCACTTCCCAGATTTTAGGTTACAACGAGTGTT 178693 Query 105573 TTGAACC 105579 | ||||| Sbjct 178694 TCGAACC 178700 >seq14 Length=143611 Score = 158 bits (174), Expect = 1e-33 Identities = 892/1401 (64%), Gaps = 58/1401 (4%) Strand=Plus/Minus Query 104232 TGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACAT 104291 || ||||||| |||||| | ||||| || || ||||| || || || || |||| | Sbjct 8398 TGGTCATGCGTGTGGCCCTGGGTATCCACGGTAGCGACATCGAGTCCGTGCTGAAGACTT 8339 Query 104292 ACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 104350 || || |||||| || || |||| |||||| | || || || || ||||| ||| Sbjct 8338 ACAACTTGATGTCATTGAGATAC-TTCACTCACGCTTCCCCCACTCTATTTAATGCCGGT 8280 Query 104351 ACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 104410 || ||| || |||||||| ||| ||||| || |||| ||||| ||||| ||| | Sbjct 8279 ACGCCACACCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATCGAA 8220 Query 104411 GGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGG 104470 ||||| || | ||| | | |||||||| || || ||| || || ||| |||| Sbjct 8219 GGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGT 8160 Query 104471 ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCA 104530 | || ||| | || | | ||| ||| |||| || || || ||| ||| Sbjct 8159 CTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCA 8100 Query 104531 GATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCT 104590 |||| | ||||| ||| | || ||||| || ||| || || || || | |||| | Sbjct 8099 AATGGGTTGATTCCCATGATCCGTGTATTCAATAACACTGCACGTTACGTGGACCAAGGT 8040 Query 104591 GGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTG-AGCCATGGCACGCGGATATCA 104645 || | | || || | | || | | ||||| |||||||||| || || ||| Sbjct 8039 GGTAA-CAAGAGACCCGGTGCCTTTGCCCTTT-TCTTGGAGCCATGGCATGCAGACATCT 7982 Query 104646 TGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC-GCGATCTC 104704 | || || |||| | | | || ||| | || || || ||| | ||| | Sbjct 7981 TCGACTTTGTTGATATCAGAAAAACTCATGGTAAGGAAGAAATTCG-TGCAAGAGATTTG 7923 Query 104705 TTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGG 104764 ||| | || || |||||||| ||||| ||||||||| | || || ||| ||| ||| Sbjct 7922 TTCCCTGCCCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAGGATGGGGCCTGG 7863 Query 104765 TCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAA 104824 | || |||| ||| || || ||| | ||| | |||||| || || ||| Sbjct 7862 ACCCTATTTTCACCAAGTTCTGCCCCAGGTTTGGACGACGTTTGGGGTGAAGAATTCGAA 7803 Query 104825 GCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGAT 104884 | || ||||| ||||| ||||||||| | | | | | || ||| | Sbjct 7802 GAGCTATACACCCGTTACGAAAGAGAAGGTCGTGGTAAAACCAT----CAAG--GCCCAA 7749 Query 104885 ---GTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTA 104940 |||||| | || || | |||| | ||||| || || ||||| |||| |||| |||| Sbjct 7748 AAAGTGTGGTACGCCATCTTACAAG-CACAAACAGAAACCGGTACGCCATTCATGGTTTA 7690 Query 104941 CAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAA 105000 ||||||||| |||||| ||||| || || | || |||||| ||||| || || Sbjct 7689 CAAAGACGCTTGTAACAGAAAGACCAACCAGCAAAACTTGGGTACTATCAAATCGTCGAA 7630 Query 105001 TCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC 105060 ||| ||| |||||| | || | | | | |||||| || ||||| |||||| | || Sbjct 7629 TCTGTGTTGCGAAATCGTCGAGTATTCTTCCCCAGATGAAACAGCTGTTTGTAACTTAGC 7570 Query 105061 ATCAATCGCTCTCCCCAAGTATGTGGA---TCCAGAG---------ACAAAGACATTTGA 105108 || || || || || | ||| || | ||||| ||| |||| | | Sbjct 7569 TTCCATTGCCCTACCAGCATTTGTAGAGACTTCAGAGGATGGTAAAACAGCCACATATAA 7510 Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168 || ||| | || || || | ||| |||| | ||| | || ||||| || || Sbjct 7509 TTTCCAAAGTTTACATGATATTGCTAAAGTCATCACTCATAACTTGAATAGAGTCATCGA 7450 Query 105169 TAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 | || | ||| || || ||| ||| | || ||||||||||||||| | || |||| Sbjct 7449 CCGTAACTATTATCCAGTGCCAGA-GGCTAGAAACTCTAATATGAGACACAGACCTATTG 7391 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGAT--GTAT-TCATTCTTTGTCGCCACGCATTTGATT 105284 || || ||||| ||| | || ||| ||| | || || || | ||||||| | Sbjct 7390 CCCTGGGGGTTCAAGGTTTGGCCGATACCTATATGATGCTGCGTTTAC---CATTTGAAT 7334 Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344 || |||| | | | ||| || || || || || || || || ||| | |||| Sbjct 7333 GTGAAAAAGCTCAAATACTTAATAAGCAAATTTTCGAAACTATTTACCATGCCACCCTTG 7274 Query 105345 AGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404 | || || || || || | || ||| |||| || ||||| || ||||| | Sbjct 7273 AAGCTTCTTGTGAATTAGCTCAAAAGGAAGGTAAATATTCCACTTTTGAAGGCTCTCCTG 7214 Query 105405 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA----C 105460 | || | || | | ||||| || |||||| | | | || ||| || || Sbjct 7213 CCTCTAAGGGTATTTTACAATTCGACATGTGGAATGCTAAG-CCA---TTTGGTATGTGG 7158 Query 105461 GACTGGGAAGCTCTCAAGGAACGCA---TCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517 || ||||| || | ||| | || |||| | | |||| | | ||| | | | Sbjct 7157 GATTGGGACACTTTAAAGAAGGACATTGTCAA--ACATGGGT-TAAGAAACTCTTTAACC 7101 Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTTGA 105576 ||||| ||||||||||| || || || | |||| |||||||| | |||||||| || || Sbjct 7100 ATGGCCCCAATGCCAACCGCTTCTACATCCCAAATTCTTGGGT-ACAATGAATGTTTCGA 7042 Query 105577 ACCCTACACGACGAACATCTA 105597 ||| ||| | ||||| || Sbjct 7041 ACCAGTCACTTCAAACATGTA 7021 >seq2 Length=549560 Score = 82.4 bits (90), Expect = 9e-11 Identities = 113/157 (72%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 154118 GCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCGGGTGTTGTTGAT 154177 |||||| |||| || || || |||||| | ||||| ||| ||||| |||||||| || Sbjct 461650 GCGCCAAGATCAGGCCTAGCAGTGAAAAACGGTATTCAAACGGGTGCTGGTGTTGTCGAC 461709 Query 154178 CCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGACAAAGACTTTGAG 154237 |||||||| ||||||||||| || | | || ||||| | | || || || | | Sbjct 461710 AGAGACTACACCGGTGAAGTCAAGGTTATCTTATTTAATCATTCACAGAAGGATTTCGCG 461769 Query 154238 GTAAAGAGGGGTGAGCGCATCGCACAACTTGTTCTTG 154274 | || | ||||| || ||||| ||| ||| ||||| Sbjct 461770 ATCAAAAAAGGTGATCGTATCGCCCAA-TTGATCTTG 461805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260399008200