Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq4 170 2e-37
seq14 131 2e-25
seq28 120 3e-22
>seq4
Length=235297
Score = 170 bits (188), Expect = 2e-37
Identities = 348/509 (68%), Gaps = 6/509 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251
||||| | |||||||| ||||| |||||||| || | | || || || || ||
Sbjct 177344 TCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCTCTA-GAAACCTAT 177402
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
|||| ||| || ||| |||||||| |||||| | ||||| | ||||||||||||||
Sbjct 177403 AACTTGATGTCCCTAAAATACTTTACTCACGCCTCTCCAACTTTATTCAACGCTGGTACA 177462
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
| ||||| ||||| ||| ||||| || || ||||||||||| || || || ||
Sbjct 177463 CCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGATTCCATTGAAGGT 177522
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|||||||| || | ||||| ||||| || ||||| | |||||||| ||| |
Sbjct 177523 ATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTA 177582
Query 53432 CACTGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| | || ||| | ||||| | |||| | || || |||||||| | |
Sbjct 177583 CA-TATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAACGGGACTTCTAA 177641
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| | | |||||| |||| |||||||||||||| ||||| || || ||||||||||
Sbjct 177642 CGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGTTGACCAGGGTGG 177701
Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
| ||| | || | || || | || | ||||| |||||||| || || | ||
Sbjct 177702 TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTTCGA 177761
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTA 53669
|| |||| | | |||||| ||| | ||||| || || ||| | || | ||
Sbjct 177762 CTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TGCGAGAGATTTATTCC 177820
Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATG 53698
||||||| ||| |||| || || ||||||
Sbjct 177821 CAGCTCTATGGGTTCCCGATCTTTTCATG 177849
>seq14
Length=143611
Score = 131 bits (144), Expect = 2e-25
Identities = 341/517 (66%), Gaps = 10/517 (2%)
Strand=Plus/Minus
Query 53187 ATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTG--- 53243
|||| ||||||| || ||| |||||||||||||| |||| || |||||||
Sbjct 8401 ATCTGGTCATGCGTGTGGCCCTGGGTATCCACGGTAGCGAC----ATCGAGTCCGTGCTG 8346
Query 53244 -AGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
|||| ||| |||| ||| | ||||| || ||||| | || || || || ||
Sbjct 8345 AAGACTTACAACTTGATGTCATTGAGATACTTCACTCACGCTTCCCCCACTCTATTTAAT 8286
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
|| |||||| |||||||| ||||| || |||||| | || |||||||| |||||
Sbjct 8285 GCCGGTACGCCACACCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCC 8226
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
||||| || || ||||| || | || ||||||||| || |||||| | ||||||
Sbjct 8225 ATCGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGT 8166
Query 53423 ATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGC 53482
| ||| | || | || | ||| | | ||| | || || || |||||
Sbjct 8165 GTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGT 8106
Query 53483 GTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAAC 53542
| |||| | | || ||| |||| || ||||| ||||| || || ||||| ||
Sbjct 8105 ACTTCAAATGGGTTGATTCCCATGATCCGTGTATTCAATAACACTGCACGTTACGTGGAC 8046
Query 53543 CAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGAC 53602
|| |||||| ||| | || | || ||| | | | | ||||| ||||| || |||
Sbjct 8045 CAAGGTGGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGAC 7986
Query 53603 ATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGA 53661
|| | || ||| | || | | | ||| ||| | ||||| || || ||| | ||
Sbjct 7985 ATCTTCGACTTTGTTGATATCAGAAAAACTCATGGTAAGGAAGAAATTCG-TGCAAGAGA 7927
Query 53662 CCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698
|||| | || || |||||||| || || ||||||
Sbjct 7926 TTTGTTCCCTGCCCTATGGATTCCTGATCTTTTCATG 7890
>seq28
Length=374213
Score = 120 bits (132), Expect = 3e-22
Identities = 295/437 (68%), Gaps = 13/437 (3%)
Strand=Plus/Minus
Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809
|||||| || ||| | ||||| ||||||| |||| ||| || || || | | ||
Sbjct 39910 GGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAACC 39851
Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869
||||| | || | ||||||||||| ||||||| |||||| || ||||||||
Sbjct 39850 GGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAGAC 39791
Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----A 74925
||||||| | || || ||||| || | || ||||| | ||||||| ||| |
Sbjct 39790 ACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGG-CGTCCTGGA 39732
Query 74926 TCCAAGTCTGAGCCCATTCAG-CTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGG 74984
|||| | | |||||||| | ||| ||| || | |||| || ||||| || | |
Sbjct 39731 TCCATCTAAGGGCCCATTCGGCCTTCTCG-CAGATTTCTGGGATGGTGTCGATGGCGTTG 39673
Query 74985 AAGAGG--CTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042
|| | | || || ||| ||| ||| ||||||| | |||| |||| | ||||| |
Sbjct 39672 AACAAGAACTCGCTTTC-CTT-GGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAGG 39615
Query 75043 TCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101
| || || || || |||| | ||| |||| || |||||||| | ||||| |
Sbjct 39614 TTTCGGAGTGGATGTTCTCGAT-CGCGATCTGGAACCCGTAGAAACTCTTGGCCTCCGGG 39556
Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161
||||| || || | || || ||| | | | || || ||||||| ||||| ||||||
Sbjct 39555 ATCTGGACCTCGGTGGAGAAGTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGCG 39496
Query 75162 GCGAAAAAAGCCAGTAC 75178
||||| || || || ||
Sbjct 39495 GCGAAGAAGGCAAGCAC 39479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215623789000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |