Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4 170 2e-37 seq14 131 2e-25 seq28 120 3e-22 >seq4 Length=235297 Score = 170 bits (188), Expect = 2e-37 Identities = 348/509 (68%), Gaps = 6/509 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 ||||| | |||||||| ||||| |||||||| || | | || || || || || Sbjct 177344 TCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCTCTA-GAAACCTAT 177402 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 |||| ||| || ||| |||||||| |||||| | ||||| | |||||||||||||| Sbjct 177403 AACTTGATGTCCCTAAAATACTTTACTCACGCCTCTCCAACTTTATTCAACGCTGGTACA 177462 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | ||||| ||||| ||| ||||| || || ||||||||||| || || || || Sbjct 177463 CCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGATTCCATTGAAGGT 177522 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 |||||||| || | ||||| ||||| || ||||| | |||||||| ||| | Sbjct 177523 ATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTA 177582 Query 53432 CACTGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || | || ||| | ||||| | |||| | || || |||||||| | | Sbjct 177583 CA-TATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAACGGGACTTCTAA 177641 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || | | |||||| |||| |||||||||||||| ||||| || || |||||||||| Sbjct 177642 CGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGTTGACCAGGGTGG 177701 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 | ||| | || | || || | || | ||||| |||||||| || || | || Sbjct 177702 TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTTCGA 177761 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTA 53669 || |||| | | |||||| ||| | ||||| || || ||| | || | || Sbjct 177762 CTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TGCGAGAGATTTATTCC 177820 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATG 53698 ||||||| ||| |||| || || |||||| Sbjct 177821 CAGCTCTATGGGTTCCCGATCTTTTCATG 177849 >seq14 Length=143611 Score = 131 bits (144), Expect = 2e-25 Identities = 341/517 (66%), Gaps = 10/517 (2%) Strand=Plus/Minus Query 53187 ATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTG--- 53243 |||| ||||||| || ||| |||||||||||||| |||| || ||||||| Sbjct 8401 ATCTGGTCATGCGTGTGGCCCTGGGTATCCACGGTAGCGAC----ATCGAGTCCGTGCTG 8346 Query 53244 -AGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 |||| ||| |||| ||| | ||||| || ||||| | || || || || || Sbjct 8345 AAGACTTACAACTTGATGTCATTGAGATACTTCACTCACGCTTCCCCCACTCTATTTAAT 8286 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 || |||||| |||||||| ||||| || |||||| | || |||||||| ||||| Sbjct 8285 GCCGGTACGCCACACCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCC 8226 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 ||||| || || ||||| || | || ||||||||| || |||||| | |||||| Sbjct 8225 ATCGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGT 8166 Query 53423 ATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGC 53482 | ||| | || | || | ||| | | ||| | || || || ||||| Sbjct 8165 GTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGT 8106 Query 53483 GTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAAC 53542 | |||| | | || ||| |||| || ||||| ||||| || || ||||| || Sbjct 8105 ACTTCAAATGGGTTGATTCCCATGATCCGTGTATTCAATAACACTGCACGTTACGTGGAC 8046 Query 53543 CAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGAC 53602 || |||||| ||| | || | || ||| | | | | ||||| ||||| || ||| Sbjct 8045 CAAGGTGGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGAC 7986 Query 53603 ATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGA 53661 || | || ||| | || | | | ||| ||| | ||||| || || ||| | || Sbjct 7985 ATCTTCGACTTTGTTGATATCAGAAAAACTCATGGTAAGGAAGAAATTCG-TGCAAGAGA 7927 Query 53662 CCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 |||| | || || |||||||| || || |||||| Sbjct 7926 TTTGTTCCCTGCCCTATGGATTCCTGATCTTTTCATG 7890 >seq28 Length=374213 Score = 120 bits (132), Expect = 3e-22 Identities = 295/437 (68%), Gaps = 13/437 (3%) Strand=Plus/Minus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || ||| | ||||| ||||||| |||| ||| || || || | | || Sbjct 39910 GGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAACC 39851 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| | || | ||||||||||| ||||||| |||||| || |||||||| Sbjct 39850 GGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAGAC 39791 Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----A 74925 ||||||| | || || ||||| || | || ||||| | ||||||| ||| | Sbjct 39790 ACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGG-CGTCCTGGA 39732 Query 74926 TCCAAGTCTGAGCCCATTCAG-CTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGG 74984 |||| | | |||||||| | ||| ||| || | |||| || ||||| || | | Sbjct 39731 TCCATCTAAGGGCCCATTCGGCCTTCTCG-CAGATTTCTGGGATGGTGTCGATGGCGTTG 39673 Query 74985 AAGAGG--CTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042 || | | || || ||| ||| ||| ||||||| | |||| |||| | ||||| | Sbjct 39672 AACAAGAACTCGCTTTC-CTT-GGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAGG 39615 Query 75043 TCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101 | || || || || |||| | ||| |||| || |||||||| | ||||| | Sbjct 39614 TTTCGGAGTGGATGTTCTCGAT-CGCGATCTGGAACCCGTAGAAACTCTTGGCCTCCGGG 39556 Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161 ||||| || || | || || ||| | | | || || ||||||| ||||| |||||| Sbjct 39555 ATCTGGACCTCGGTGGAGAAGTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGCG 39496 Query 75162 GCGAAAAAAGCCAGTAC 75178 ||||| || || || || Sbjct 39495 GCGAAGAAGGCAAGCAC 39479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215623789000