Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq17 149 7e-31 seq14 147 2e-30 seq20 136 5e-27 seq13 129 7e-25 seq26 113 5e-20 seq4 95.1 1e-14 >seq17 Length=83854 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| |||||||| || | || || |||||||| ||| | ||||| || || | Sbjct 56177 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAGACTATCACTTTAGAGGTCGAATCTTCT 56118 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||| ||| || ||||||||||| || ||||| |||||||| Sbjct 56117 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAA 56058 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||| || || ||||| || |||| | | || || |||||||||| Sbjct 56057 CAGAGATTGATTTTTGCAGGGAAACAACTGGAAGATGGTAGAACGCTGTCAGACTATAAC 55998 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||| || ||||| | ||| || | || | ||||| Sbjct 55997 ATTCAAAAGGAATCTACCCTTCACTTGGTCCTGAGACTAAGAGGTGG 55951 Score = 145 bits (160), Expect = 9e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || || || |||||||||||| | ||||| || || | Sbjct 56861 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 56802 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | || | ||| | ||||| ||||||||||| || |||||||| ||||| Sbjct 56801 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 56742 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | ||||| |||||||| ||||| || || | | | || || | || || || Sbjct 56741 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGATTACAAC 56682 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | |||||||||||||||||||| Sbjct 56681 ATTCAAAAGGAATCCACTCTTCA 56659 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || || ||||| ||||| || || | |||||||| | | Sbjct 56405 ATGCAGATTTTTGTCAAAACTCTGACCGGTAAGACCATAACCTTGGAGGTTGAATATTCT 56346 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| |||| || ||||||||||| || |||||||| ||||| Sbjct 56345 GACACCATCGATAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 56286 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | ||||| |||||||| ||||| || || | | | || ||| | || || || Sbjct 56285 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCGGATTACAAC 56226 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | ||||| || ||||||||||| Sbjct 56225 ATTCAAAAAGAGTCCACTCTTCA 56203 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || || || || |||||||| ||| | ||||| || || | Sbjct 56633 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACTATCACTTTGGAGGTCGAATCTTCT 56574 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||| ||| || ||||||||||| || ||||| |||||||| Sbjct 56573 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAA 56514 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||| ||||| || | || |||| | | || || | || || || Sbjct 56513 CAGAGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTAGAACGCTGTCGGATTACAAC 56454 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | ||||||||||| || ||||| Sbjct 56453 ATTCAAAAGGAATCTACCCTTCA 56431 >seq14 Length=143611 Score = 147 bits (162), Expect = 2e-30 Identities = 524/803 (65%), Gaps = 32/803 (4%) Strand=Plus/Plus Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 ||||||||||||| |||| ||| || || || || ||||||| ||||| |||||| | Sbjct 7607 ACTCGACGATTTCGCAACACAGATTCGACGATTTGATAGTACCCAAGTTTTGCTGGTTGG 7666 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||| ||| |||||||| ||||| |||| | || |||||||| || |||| || Sbjct 7667 TCTTTCTGTTACAAGCGTCTTTGTAAACCATGAATGGCGTACCGGTTTCTGTTTGTG-CT 7725 Query 81068 TG-AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGC--GGAATTTGCCTTCGG 81124 || | |||||||| ||| | | | ||||||| || | || ||||| Sbjct 7726 TGTAAGATGGCGTACCACACTTTTTGGGCCTTGATGGTTTTACCACGA-----CCTTCTC 7780 Query 81125 CCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCT-GG 81182 | || || ||| ||| || ||||| | |||| || || | || || Sbjct 7781 TTTCGTAACGGGTGTATAGC-TCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGG 7839 Query 81183 GCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGC 81242 ||| || | | | || ||| |||| | || | || ||| |||||||||| Sbjct 7840 GCAGAACTTGGTGAAAAT-AGGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAG 7898 Query 81243 GTCAGGGATCCAGAGGGCGGTGAACAGGTCGC-GGCAGCGCGCCTCCTCATCACCCTGGT 81301 ||||| ||||| ||||| | ||||| || | ||| || || || | ||| || Sbjct 7899 ATCAGGAATCCATAGGGCAGGGAACAAATCTCTTGCA-CGAATTTCTTCCTTACCATGAG 7957 Query 81302 TGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGA 81361 | | | || | |||||| | |||||| |||||||||||||||| | | ||| | Sbjct 7958 TTTTTCTGATATCAACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAA 8017 Query 81362 TCG-AC-----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATA 81415 | || | |||| | ||||| |||| |||||||| ||||| || |||| Sbjct 8018 AGGCACCGGGTCTCTTGTTA---CCACCTTGGTCCACGTAACGTGCAGTGTTATTGAATA 8074 Query 81416 CACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCT 81475 |||| | ||| || || | |||| ||| |||||| ||||| | ||| || || Sbjct 8075 CACGGATCATGGGAATCAACCCATTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTG 8134 Query 81476 TGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCAC 81535 ||| || | ||| |||| |||||| | ||||||| ||| |||||| |||| Sbjct 8135 TGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCAC 8194 Query 81536 ACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAAC 81595 || |||| || || ||||| || |||||| || | |||||| ||| || ||||| Sbjct 8195 ACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGTCGTCCTTCATGGCAATCAGGAAAC 8254 Query 81596 AGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGA 81655 | ||||| |||||| | | |||||||| || || || |||| |||||| ||| Sbjct 8255 AAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAAATAGAGTGGGGGAAGCGTGAGTGA 8314 Query 81656 AATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGA----ATATCGTCACCG 81711 | || | |||||||| || || || ||| | || ||| || ||| |||| Sbjct 8315 AGTATCTCAATGACATCAAGTTGTAAGT---CTTCA-GCACGGACTCGATGTCGCTACCG 8370 Query 81712 TGAATACCGATAGCTACACGCAT 81734 || ||||| | || |||||||| Sbjct 8371 TGGATACCCAGGGCCACACGCAT 8393 >seq20 Length=304555 Score = 136 bits (150), Expect = 5e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | ||||| ||||||||||| ||||| ||||| || Sbjct 8671 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCA 8730 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||| |||| ||||| |||||||| || ||||| || ||||| Sbjct 8731 GACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAA 8790 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || || | | || | | ||||| || Sbjct 8791 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTACAAC 8850 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| |||||| | || | |||||| Sbjct 8851 ATCCAAAAGGAGTCCACTTTACACTTGGTCTTG 8883 >seq13 Length=154029 Score = 129 bits (142), Expect = 7e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 |||||||| || | || || ||||| || ||| | || ||||| || ||| | ||| Sbjct 46632 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 46691 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || ||||| |||||||| || || ||||| ||||| || | || Sbjct 46692 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 46751 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || || | | | ||| | | ||||| || |||||||| Sbjct 46752 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAG 46811 Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618 ||||||||| | ||| |||||||| Sbjct 46812 GAATCCACTTTACATTTAGTCTTG 46835 >seq26 Length=194426 Score = 113 bits (124), Expect = 5e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| | || || ||||| || ||||| || ||||| || ||| | ||| Sbjct 159093 CTTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCAT 159034 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 || ||| | || | || ||||| ||||| || || || || || ||||| || | | Sbjct 159033 TGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATT 158974 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || ||||||||||||||| | || || | | | ||| | | ||||| || | ||||| Sbjct 158973 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAA 158914 Query 27594 GGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| | ||| |||||||| Sbjct 158913 GGAATCCACTTTACATTTAGTCTTG 158889 >seq4 Length=235297 Score = 95.1 bits (104), Expect = 1e-14 Identities = 277/419 (66%), Gaps = 21/419 (5%) Strand=Plus/Minus Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC----- 81366 |||| ||||| | ||| || || ||||||||||||| ||| | || | | || Sbjct 177770 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGT 177711 Query 81367 CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426 | |||| | |||||||||| || ||||||||||| ||| || ||||| | |||| Sbjct 177710 CTCTTGTTA---CCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATA 177654 Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACC 81486 || || | || | || ||||||||||| | || || || | || || | Sbjct 177653 GGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATG 177594 Query 81487 TTGCTGATTGAAAGACCGATGCCACCTGACCACTTT--GAAATCTGAGCACACCGGTTCA 81544 ||| || ||||| || ||||| | || ||| |||||| |||||| |||| Sbjct 177593 TTGTGAATATGTAGACCAATACCACC--AGCAGTTTTGGAAATCAAAGCACATTCCTTCA 177536 Query 81545 TGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACA 81604 || || || || || || ||| ||| | ||||| ||| | ||||||| |||| Sbjct 177535 AAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACA 177476 Query 81605 TCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGT 81664 | ||||| || || || || ||||| | ||||| | |||||| | || || | Sbjct 177475 TTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTA---TT 177419 Query 81665 TT---GACATCAGGTCATAGGTTTCCTTGA-CGCGTGGAATATCGTCACCGTGAATACC 81719 || ||||||| || |||||||| || || || ||| | |||||||||||||| Sbjct 177418 TTAGGGACATCAAGTTATAGGTTT-CTAGAGCGGCCTCAATGTTATCACCGTGAATACC 177361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310007911600