Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq20 93.3 3e-14
seq26 84.2 2e-11
seq13 84.2 2e-11
>seq20
Length=304555
Score = 93.3 bits (102), Expect = 3e-14
Identities = 161/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|| ||||||||||| || || ||| | || || || |||||| |||| || |||
Sbjct 8668 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 8727
Query 27847 ACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
| ||| || ||||| ||||| || || ||||| |||||| |||| |
Sbjct 8728 TCAGACACCATTGACAAT--GTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTG 8785
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | || || ||||| || || |||||||| |||| | | ||||| || |
Sbjct 8786 ACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACT 8845
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||||||| ||| |||||| || ||||| ||| | ||| | || ||
Sbjct 8846 ACAACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 8897
>seq26
Length=194426
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
|||||||||||| | || || || ||| | || || ||||| || || ||||||||
Sbjct 159008 GACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAA 158949
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| | | ||||||||| |||||||| ||||| || |||||| ||||| || |||
Sbjct 158948 GACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACATTTAGTCTTG 158889
Query 28003 CGTTTGCGTGGCGG 28016
| ||| | || ||
Sbjct 158888 AGATTGAGAGGTGG 158875
>seq13
Length=154029
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| |||||| | || || || ||| | ||||| ||||| || || ||||||||
Sbjct 46716 GACAAGGAAGGTATCCCTCCTGACCAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAA 46775
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| | | |||||| || |||||||||||||| || |||||| ||||| || |||
Sbjct 46776 GACGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCCACTTTACATTTAGTCTTG 46835
Query 28003 CGTTTGCGTGGCGG 28016
| ||| | || ||
Sbjct 46836 AGATTGAGAGGTGG 46849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355862161460985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |