Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq20 165 2e-35
seq17 163 7e-35
seq13 159 8e-34
seq35 100 7e-16
seq50 89.7 1e-12
seq23 86.0 1e-11
>seq20
Length=304555
Score = 165 bits (182), Expect = 2e-35
Identities = 168/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | |||||| || ||||||| ||||| || | ||||||||| ||
Sbjct 8886 TCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 8827
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||||
Sbjct 8826 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 8767
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| ||||| ||| ||| || ||||||||||| | ||| || || | || ||
Sbjct 8766 GTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAAT 8707
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || ||||| || | ||| | |||||| ||
Sbjct 8706 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8668
>seq17
Length=83854
Score = 163 bits (180), Expect = 7e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||||||||| | ||| || || ||||| ||||| | || || || | || |||||
Sbjct 55960 AGTCTCAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTATAGTCTGACAGCGTTCTA 56019
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|||||||| || || ||||| || || || | || |||||||| || ||||||||||||
Sbjct 56020 CCATCTTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCC 56079
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||||||| || |||||||| || | ||| || ||||| |||
Sbjct 56080 TTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCTAAAGTG 56139
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| || || |||||||| | || | ||||||
Sbjct 56140 ATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 56177
Score = 150 bits (166), Expect = 4e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||| ||||| | ||| || || ||||| ||||| | |||||||| | || |||||
Sbjct 56416 AGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTA 56475
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|||||||| | ||| || || || || || | || |||||||| || ||||||||||||
Sbjct 56476 CCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCC 56535
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||||||| || |||||||| || | ||| || || || |||
Sbjct 56536 TTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGTG 56595
Query 225676 ATCGTCTTGCCCGTCAAAGTTTT 225698
|| ||||| || || | ||||||
Sbjct 56596 ATAGTCTTACCAGTTAGAGTTTT 56618
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || ||||| | ||| |||||||| |||||||| | |||||||| | | |||||
Sbjct 56188 AGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTA 56247
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| ||||| || || || |||||||| || | | |||||||| || ||||||||||||
Sbjct 56248 CCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCC 56307
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||| || ||||||||||| || ||| || || || ||
Sbjct 56308 TTGTCCTGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTT 56367
Query 225676 ATCGTCTTGCCCGTCAAAGTTTT 225698
|| ||||| || |||| ||||||
Sbjct 56368 ATGGTCTTACCGGTCAGAGTTTT 56390
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || ||||| | ||| ||||||||||| ||||| | |||||||| | || |||||
Sbjct 56644 AGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTA 56703
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| ||||| || || || |||||||| || | | |||||||| || ||||| ||||||
Sbjct 56704 CCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCC 56763
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| ||||| || ||| || ||||| || || || | ||| || || || ||
Sbjct 56764 TTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTA 56823
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| || |||| || || | ||| | ||||||
Sbjct 56824 ATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCAT 56861
>seq13
Length=154029
Score = 159 bits (176), Expect = 8e-34
Identities = 156/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | || | ||||||||| ||||||| ||||| || | ||| ||||| ||
Sbjct 46838 TCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 46779
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 46778 GTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTT 46719
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| |||||| ||| ||| || || ||||| || | ||| || || || |||||
Sbjct 46718 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 46659
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || |||||||||||
Sbjct 46658 GGTCTTACCAGTCAAAGTTTT 46638
>seq35
Length=12389
Score = 100 bits (110), Expect = 7e-16
Identities = 188/274 (69%), Gaps = 4/274 (1%)
Strand=Plus/Plus
Query 7444 TTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATA 7503
|||||||| || || | | ||| |||||| ||| || | | ||| | || ||
Sbjct 5539 TTATATTTTATGTTAGCTATTTTTAGTGGTATGGCAGGAACAGCAATGTCTTTAATCATT 5598
Query 7504 AGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAAC 7563
|| |||||||||||||| || ||||| ||| || || ||| ||| | | |||
Sbjct 5599 AGATTAGAATTAGCTGCACCTGGTTCACAATACTTACAAGGAAATGCTCAATTATTCAAT 5658
Query 7564 GTTAT--TATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGA 7621
||| | || || ||| || || | | ||||||||||| || || ||||| | | |
Sbjct 5659 GTTTTAGTAGTA-GGC-CACGCTGTATTAATGATTTTCTTCTTAGTAATGCCTAGTTTAA 5716
Query 7622 TAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTC 7681
| || || || || |||| || | || ||||||||||||||| |||||| || || |
Sbjct 5717 TTGGTGGGTTTGGTAATTATTTATTACCATTAATGATTGGTGCTACTGATACAGCATTCC 5776
Query 7682 CAAGGCTTAACAATATAAGTTTTTGATTACTACC 7715
|||| ||||||| || |||||| || ||||
Sbjct 5777 CAAGAATTAACAAWATTGCHTTTTGAGTATTACC 5810
>seq50
Length=5733
Score = 89.7 bits (98), Expect = 1e-12
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 7735 TTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCT 7794
|||||||| ||||| ||||| ||| |||||| || ||| |||| |||||| | | |
Sbjct 1339 TTGGTAAGGTTCTTCGCGTTGCATCGAATTAATCCGCATGCTCCGCCGCTTGTGCGGGCC 1280
Query 7795 TCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843
|||||| || |||||||||||| |||||||| |||| | | |||| ||
Sbjct 1279 CCCGTCAATTCCTTTGAGTTTTAGCCTTGCGGCCGTACTCCCCAGGCGG 1231
>seq23
Length=921690
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || || ||||| || || |||||||| |||||||||||
Sbjct 23901 GAAAATTTGACCATCTGTAATGGAAATGACATTAGTTGGAATATAAGCCGAAACATCACC 23842
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTA 4561
|||| || || | |||||| | ||| ||||
Sbjct 23841 ACCTTGGGTCTCAATAACAGGCAGGGCAGTTA 23810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530359638170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |