Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq26 161 2e-34 seq20 161 2e-34 seq13 158 3e-33 seq17 143 6e-29 >seq26 Length=194426 Score = 161 bits (178), Expect = 2e-34 Identities = 155/196 (79%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954 |||||| ||| ||| ||||| ||||||||||| | |||| || | || || || | || Sbjct 158898 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-GTTCTACCGTCTTCCAATT 158956 Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014 | || || ||||||||||| | |||||||||| || ||||| || |||||||| |||| Sbjct 158957 GCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGAATCT 159016 Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074 | | ||| || | || || ||||| |||| ||| ||||| |||||||| |||||||| | Sbjct 159017 TGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATGGTCTTACCAG 159076 Query 283075 TCAAAGTCTTAACGAA 283090 |||||||||||||||| Sbjct 159077 TCAAAGTCTTAACGAA 159092 >seq20 Length=304555 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| ||| || ||||||||||||||||||| | || | ||| || || Sbjct 8879 ACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCC 8820 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | |||||||||| |||||||| ||||||||||| Sbjct 8819 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGA 8760 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | || || | || || ||||| |||| ||| ||||| || || || |||||| Sbjct 8759 ATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTA 8700 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || |||||||| ||||| || ||||| || Sbjct 8699 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8668 >seq13 Length=154029 Score = 158 bits (174), Expect = 3e-33 Identities = 154/196 (79%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954 |||||| ||| ||| ||||||||||||||||||| |||| || | || || || | || Sbjct 46826 ATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATT 46768 Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014 | || || |||||||| || | |||||||||| || ||||| ||||||||||| |||| Sbjct 46767 GCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCT 46708 Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074 ||| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| | Sbjct 46707 TTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAG 46648 Query 283075 TCAAAGTCTTAACGAA 283090 ||||||| || || || Sbjct 46647 TCAAAGTTTTGACAAA 46632 >seq17 Length=83854 Score = 143 bits (158), Expect = 6e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||| ||||| | ||||| | ||||| || ||||||||||| ||||| Sbjct 55986 TTCCTTTTGAATGTTATAGTCTGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAA 56045 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | |||||||| |||||||| |||||||| |||||||| || || | Sbjct 56046 AATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACATT 56105 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| |||| |||||| || | |||||| |||||||| || ||||| || || Sbjct 56106 GTCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGAC 56165 Query 283088 GAATATCTGCAT 283099 || || ||||| Sbjct 56166 AAAAATTTGCAT 56177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738462375970