Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq26 161 2e-34
seq20 161 2e-34
seq13 158 3e-33
seq17 143 6e-29
>seq26
Length=194426
Score = 161 bits (178), Expect = 2e-34
Identities = 155/196 (79%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954
|||||| ||| ||| ||||| ||||||||||| | |||| || | || || || | ||
Sbjct 158898 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-GTTCTACCGTCTTCCAATT 158956
Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014
| || || ||||||||||| | |||||||||| || ||||| || |||||||| ||||
Sbjct 158957 GCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGAATCT 159016
Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074
| | ||| || | || || ||||| |||| ||| ||||| |||||||| |||||||| |
Sbjct 159017 TGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATGGTCTTACCAG 159076
Query 283075 TCAAAGTCTTAACGAA 283090
||||||||||||||||
Sbjct 159077 TCAAAGTCTTAACGAA 159092
>seq20
Length=304555
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| ||| || ||||||||||||||||||| | || | ||| || ||
Sbjct 8879 ACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCC 8820
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||||||||| | |||||||||| |||||||| |||||||||||
Sbjct 8819 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGA 8760
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| |||| ||| ||||| || || || ||||||
Sbjct 8759 ATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTA 8700
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || |||||||| ||||| || ||||| ||
Sbjct 8699 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8668
>seq13
Length=154029
Score = 158 bits (174), Expect = 3e-33
Identities = 154/196 (79%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954
|||||| ||| ||| ||||||||||||||||||| |||| || | || || || | ||
Sbjct 46826 ATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATT 46768
Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014
| || || |||||||| || | |||||||||| || ||||| ||||||||||| ||||
Sbjct 46767 GCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCT 46708
Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074
||| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| |
Sbjct 46707 TTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAG 46648
Query 283075 TCAAAGTCTTAACGAA 283090
||||||| || || ||
Sbjct 46647 TCAAAGTTTTGACAAA 46632
>seq17
Length=83854
Score = 143 bits (158), Expect = 6e-29
Identities = 147/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||| ||||| | ||||| | ||||| || ||||||||||| |||||
Sbjct 55986 TTCCTTTTGAATGTTATAGTCTGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAA 56045
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | |||||||| |||||||| |||||||| |||||||| || || |
Sbjct 56046 AATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACATT 56105
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| |||||| || | |||||| |||||||| || ||||| || ||
Sbjct 56106 GTCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGAC 56165
Query 283088 GAATATCTGCAT 283099
|| || |||||
Sbjct 56166 AAAAATTTGCAT 56177
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738462375970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |