Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07]
55 sequences; 11,656,823 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq17 136 1e-26
seq26 127 5e-24
seq20 120 7e-22
>seq17
Length=83854
Score = 136 bits (150), Expect = 1e-26
Identities = 154/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || |||||||| || || || || || ||| | ||||| ||| || |||
Sbjct 56402 CAGATTTTTGTCAAAACTCTGACCGGTAAGACCATAACCTTGGAGGTTGAATATTCTGAC 56343
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| ||||| || ||||||||||| ||
Sbjct 56342 ACCATCGATAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAACAG 56283
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || ||||| || ||||| || ||||| || || || || | ||||| ||| |
Sbjct 56282 AGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCGGATTACAACATT 56223
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|||||||| || || || || ||||
Sbjct 56222 CAAAAAGAGTCCACTCTTCA-CTTG 56199
Score = 118 bits (130), Expect = 3e-21
Identities = 150/205 (73%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || || || || || | ||||| ||| || ||
Sbjct 56858 CAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCTGAT 56799
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| || || |||||||| ||||| || ||||||||||| ||
Sbjct 56798 ACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAACAG 56739
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || ||||| || ||||| || ||||| || || || || | ||||| ||| |
Sbjct 56738 AGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGATTACAACATT 56679
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| ||||| || || || ||||
Sbjct 56678 CAAAAGGAATCCACTCTTCA-CTTG 56655
>seq26
Length=194426
Score = 127 bits (140), Expect = 5e-24
Identities = 158/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || ||| | || || || || ||||| || || || ||| || ||||||||
Sbjct 159092 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 159033
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || |||||| |||||||| ||||||||||| ||||| || ||||| ||| || |
Sbjct 159032 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 158973
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAA 178108
||||| || || || || | ||||| || || || |||| |||| || ||| | |||||
Sbjct 158972 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAAC-CTTGTCCGACTACAACATTCAAAA 158914
Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || | ||| | || |||||| | |||
Sbjct 158913 GGAATCCACTTTACATTTAGTCTTGAGATTGAGA 158880
>seq20
Length=304555
Score = 120 bits (132), Expect = 7e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || ||| | || || || || || ||||| || || ||| ||||||
Sbjct 8674 CAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCAGAC 8733
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || ||||| |||||||| ||||| ||||| || || || ||||| |||
Sbjct 8734 ACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAACAA 8793
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || || || | ||||| || || ||| | | || || ||| ||
Sbjct 8794 AGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTACAACATC 8853
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || || || | || | || |||||| | |||
Sbjct 8854 CAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGA 8892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730351745670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |