Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq17 102 8e-17 >seq17 Length=83854 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | ||| | || |||| || || ||| ||||| |||||||| || || || Sbjct 56635 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGAC 56694 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | |||| || || || || || ||||| |||| | ||||||||||| ||| Sbjct 56695 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 56754 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| |||||| ||| ||| | | | ||| || || || || Sbjct 56755 ATGCCTTCCTTGTCCTGGATTTTGGACTT-GACGTTGTCGATAGTATCAGAAGATTCGAC 56813 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || ||||| ||||| ||||| |||||||| ||||| Sbjct 56814 CTCCAAAGTAATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCAT 56861 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/232 (69%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | ||| | || |||| || || ||| ||| || |||||||| || || || Sbjct 56179 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGAT 56238 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | |||| || || || || || ||||| |||| | ||||||||||| ||| Sbjct 56239 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 56298 Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGACT 41810 | | ||||||||| ||| || ||| | | | ||| | ||||| | | Sbjct 56299 ATACCTTCCTTGTCCTGGATCTTAGACTTGACGTTATCGATG-----GTGTCAGAATATT 56353 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||||| ||||| || ||||| ||||| || || || ||||||||||| Sbjct 56354 CAACCTCCAAGGTTATGGTCTTACCGGTCAGAGTTTTGACAAAAATCTGCAT 56405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303682166000