Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq14 109 5e-19 seq19 98.7 8e-16 seq40 84.2 2e-11 seq16 84.2 2e-11 >seq14 Length=538356 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 || |||||||| ||| |||| || || || || || || |||||| ||| ||| | Sbjct 529691 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 529632 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 |||| || | | | || ||||| || ||| || || |||||| | || || Sbjct 529631 TCAGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 529572 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 ||||||||| | |||||||| || || ||||||||||| || |||| || | || ||| Sbjct 529571 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 529512 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || |||||||| || ||| | ||| |||| || |||| |||| || Sbjct 529511 AACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 529462 >seq19 Length=415998 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || || |||||| | || ||| ||||| ||| | || ||||| || ||||| |||||| Sbjct 68121 GACAAGGAAGGTATTCCTCCAGACCAACAGAGATTGATTTTTGCAGGTAAACAGTTGGAA 68062 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| | ||| || | |||||||| ||||||||||||||||| |||||| |||| || Sbjct 68061 GATGGTAGAACGCTGTCGGATTACAACATTCAAAAGGAATCTACCCTTCACTTGGTCCTA 68002 Query 25248 CGATTACGAGGAGG 25261 || || |||| || Sbjct 68001 AGACTAAGAGGTGG 67988 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || || |||||| | || ||| ||||| ||| | || ||||| || |||||| ||||| Sbjct 67665 GACAAGGAAGGTATTCCTCCAGACCAACAGAGATTGATTTTTGCAGGGAAACAACTGGAA 67606 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| | ||| || | || || || ||||||||||||||||| |||||| |||| | Sbjct 67605 GATGGTAGAACGCTGTCAGACTATAACATTCAAAAGGAATCTACCCTTCACTTGGTCCTG 67546 Query 25248 CGATTACGAGGAGG 25261 || || |||| || Sbjct 67545 AGACTAAGAGGTGG 67532 >seq40 Length=705427 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || ||||||||| | || || ||||||||| | |||||||| || || ||||||||| Sbjct 667831 GACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAA 667772 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 || | ||| || |||| ||||| |||||||||||||| ||| | || | || || Sbjct 667771 GACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACATTTAGTCTTG 667712 Query 25248 CGATTACGAGGAGG 25261 |||| |||| || Sbjct 667711 AGATTGAGAGGTGG 667698 >seq16 Length=189800 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107 ||||||| ||||| || || ||||| || ||| ||| | | || || | | | Sbjct 50630 TCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACA 50689 Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167 || ||||| ||| ||| || || |||||| | || || ||||||||| | |||| Sbjct 50690 ATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTAATCT 50749 Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227 |||| || || ||||||||||| | ||| || | || ||||| || |||||||||| Sbjct 50750 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAAT 50809 Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 | ||| | || | || || |||| |||| || Sbjct 50810 CCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 50843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796549670700