Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq19 104 2e-17 seq24 91.5 1e-13 >seq19 Length=415998 Score = 104 bits (114), Expect = 2e-17 Identities = 152/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA---TCC 118586 |||||||| | || ||||||||||||||||||||||| |||| | | || || Sbjct 67778 ACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCG--ATAGCGTTC-TACCGTCT 67834 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || || ||||| |||||| | || | | ||| || || ||||| || || |||||||| Sbjct 67835 TCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCC 67894 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 || || || || | |||| |||||| | || ||||| | ||| | || Sbjct 67895 TGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTC 67954 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||||||||||||| |||||||||||||| Sbjct 67955 TTACCGGTCAGAGTTTTGACAAAAATCTGCAT 67986 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | || ||| | |||||||| | ||||| || ||||||||||||||||| Sbjct 67986 TACCACCTCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCG 68045 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | ||| || | |||||| || || | || | | ||| || || |||| Sbjct 68046 ACAGCGTTCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAG 68105 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || |||||||| || || || || | || | |||||| | |||| Sbjct 68106 GAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGA 68165 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || || || |||||||| |||||||||||||| Sbjct 68166 CCTCCAAAGTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 68214 >seq24 Length=351367 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 44855 GAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCG 44914 ||| || ||||||| |||||| ||||||| || ||||| || ||| || || | Sbjct 17215 GAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTCTCCGGGTCCTTCGCCTCC 17274 Query 44915 ATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATT 44974 || || | |||| | | || |||||||||| |||| || ||||||| |||| Sbjct 17275 ATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTCTCCAACGAACTGATC 17334 Query 44975 TCGAGAGACGAAGGTCTGCACACCAACTTTGCCTG 45009 | |||||||||||| |||||||| |||||||||| Sbjct 17335 TGCAGAGACGAAGGTTTGCACACCGACTTTGCCTG 17369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830135634600