Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq24 120 6e-22 >seq24 Length=351367 Score = 120 bits (132), Expect = 6e-22 Identities = 283/426 (66%), Gaps = 15/426 (4%) Strand=Plus/Plus Query 101936 GAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTATT 101995 ||||| ||||||| || | ||||| ||||| |||||| | ||||| || ||||| Sbjct 17242 GAAGGTGTCTTCTTCTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATG 17301 Query 101996 TTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGAC 102055 |||| ||| | |||| |||||| || | || | || ||||||||| | || |||| Sbjct 17302 ATGCCCGGTTTGACCTTCTCCAACGAACTGATCTGCAGAGACGAAGGTTTGCACACCGAC 17361 Query 102056 TTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAGGATTCTT 102115 ||||| || || |||| | |||| | | | | || || || | Sbjct 17362 TTTGCCTGTTTGTTGTTCGCCCAC-------TTGAAAAACAAGCCGGACCCAGCCATCGT 17414 Query 102116 G----AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCC 102171 |||| ||||| || |||||| || |||||| || || || || |||| Sbjct 17415 CGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACAAAGATACTTCCTAGACGCCTTGCC 17474 Query 102172 TGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGA 102231 || || | || |||||| | | ||||||| ||| ||| | || || || ||||| Sbjct 17475 AGTCGCCTTGCTAGGTATGAACGCCGACTTGATGAACCAATACGTCGAGTTCGTCGCAGA 17534 Query 102232 TAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCA 102289 | ||| ||||| | | || || |||| | |||| || || |||||||||| Sbjct 17535 CAGACTCTTGGTCGCCTTCGGTAACAAGAA--GTACTACAAGGTCGACAACCCCTTCGAT 17592 Query 102290 TTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAG 102349 |||||||| || |||||| | | |||||||||||| || |||||||||||| |||| Sbjct 17593 TTCATGGAAAACATTTCCTTGGCCGGTAAGACCAACTTCTTCGAAAAGAGAGTCTCCGAC 17652 Query 102350 TATCAA 102355 || ||| Sbjct 17653 TACCAA 17658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583366047750