Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 170 2e-37
seq17 132 5e-26
>seq5
Length=188055
Score = 170 bits (188), Expect = 2e-37
Identities = 520/791 (66%), Gaps = 21/791 (3%)
Strand=Plus/Minus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
|||| || |||| |||| | || || | || |||||||| ||||||||| || ||
Sbjct 53096 TCAATGGTAAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAATACATACCGGTC 53037
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
||||| || |||| ||||| ||||||||||| || || || | || || |
Sbjct 53036 TTTAGACCTTTCTTCCAACCGTAGAAATGCATACTTGTTAGCTTACCCATGGTTGGGGCA 52977
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCA 36967
| ||| ||| || || |||||| || ||||| | | |||||||||||
Sbjct 52976 CGCAAGAATAAATTCAAAGAATGGGATTGATCGATGTAAACGG--CACGGTCGGCTGCCA 52919
Query 36968 TTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027
| | | ||| ||||| || || |||||||| || ||||| | | ||| | | |
Sbjct 52918 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTATACAAATCTTTCAATTCTT 52859
Query 37028 CTGGTAAATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATT-CTTTATG 37083
||||| | | ||| |||||| |||||||| ||| | | |||| ||| ||
Sbjct 52858 GTGGTACGTTTGGTAAACCTTGAATGGAACCATTTTGTGTGATTAGA-TATTGCTTCATA 52800
Query 37084 TCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143
||| || ||| ||| | | | || | || || || |||||| || || |||
Sbjct 52799 CCATCATCCCAAATACCCAAATCAACCAAATCACGCAGTAAGTATGGATTGACGACTTGA 52740
Query 37144 AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCA 37203
|| || ||||||| || | | | || || ||| |||| |||||| | ||||
Sbjct 52739 AATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACTGGTTCGAAACACTCG 52680
Query 37204 TTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTAT 37261
|| | || ||| || || || || |||||||||||||| ||||| || | ||| |
Sbjct 52679 TTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCCATGGTCAAAGAGT-- 52622
Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTT---AGTTCATTCCAATCCCATAAATCTG 37318
|||| | ||||| | | || || ||| | ||| || ||||||||| | | | |
Sbjct 52621 TTCTAACACCATGCTTCATGATG-TCATTTCTCAAAGT--ATCCCAATCCCACATACC-G 52566
Query 37319 TTGGGTTCTTTAACC-ACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTA 37377
| |||| || || |||| || |||| || ||||||| | |||||||| | |
Sbjct 52565 TAAGGTTTTTCGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGG 52506
Query 37378 TATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAA 37437
| || || || || || | ||| |||||| || ||| | ||| | | ||||
Sbjct 52505 AAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGG 52446
Query 37438 TATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAG 37497
|| || ||||| || ||||||||||||| || |||||||||| ||||||| |
Sbjct 52445 TACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAGTCGAATGGTAAA 52386
Query 37498 CCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTC 37557
| ||| || || || ||||||||||| || ||||| | | | || || || ||| ||
Sbjct 52385 CGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTC 52326
Query 37558 TTATTAGATCT 37568
||||||||||
Sbjct 52325 ATATTAGATCT 52315
Score = 168 bits (186), Expect = 6e-37
Identities = 414/625 (66%), Gaps = 2/625 (0%)
Strand=Plus/Minus
Query 38010 TTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGT 38069
|| ||| || || | ||| || | ||| || ||||||| || | ||||||||| | |
Sbjct 51858 TTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGC 51799
Query 38070 TCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTG 38129
| |||||| || || ||||||||| | | | || ||||| |||||||||||
Sbjct 51798 ACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTG 51739
Query 38130 CCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATA 38189
|||||| || | ||| | | | || || ||||| || | ||| ||||| | || |||
Sbjct 51738 CCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATA 51679
Query 38190 TCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTAT 38249
| | ||||| || | | | | |||||| | || || ||||| | ||||| |
Sbjct 51678 ACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGT 51619
Query 38250 ACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGC 38309
||| | || |||| || | || || || || || | || || ||||| ||
Sbjct 51618 ACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGC 51559
Query 38310 ATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATC 38369
| ||| || || ||||| |||| || || || || | |||||||| || |||||
Sbjct 51558 AGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATC 51499
Query 38370 CTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAA 38429
||| |||| | || ||||| |||||||||||| ||| || || ||||| |||||
Sbjct 51498 CTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAA 51439
Query 38430 TGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATC 38489
|| ||||| || || | || ||||| |||| | ||||| ||||||| | |
Sbjct 51438 AGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGC 51379
Query 38490 ATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549
|| || | | | ||||||||||||| | || ||||| | | |||||||| | |||
Sbjct 51378 CTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTC 51319
Query 38550 TATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATA 38609
| || | || | | | || ||||| |||||| ||||| | || || ||
Sbjct 51318 AGCAACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTA 51259
Query 38610 ACTATA-TGAATAATCTCTATCGTA 38633
||| || |||| ||||||| || ||
Sbjct 51258 ACTGTACTGAA-AATCTCTGTCATA 51235
>seq17
Length=290845
Score = 132 bits (146), Expect = 5e-26
Identities = 520/802 (65%), Gaps = 37/802 (5%)
Strand=Plus/Minus
Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873
|| || | || |||||||| || ||||| ||||| ||||| ||| |||| |||||
Sbjct 197054 GAAGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTTAGACCCTTCTTCCAACCGTAG 196995
Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTA---GGATTATCTATATATATTGTCATTGAT 36930
||||||||||| || | |||| | || | ||||| | | | ||| || ||
Sbjct 196994 AAATGCATACTTGTAA-TTTTACCCATTGATGGGGATTGTAGGAAAAGATT--CAAGGAG 196938
Query 36931 TGACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAG 36988
|| |||||| || ||| | | | | | || ||||| | | ||| |||||||
Sbjct 196937 TGGGATTGATCAATGTAAATGGAACGAT--CAGCAGCCATGTTGATAATGGTCTTTTGAG 196880
Query 36989 ATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTT 37045
| || |||||||| |||||||||| | ||| | | | || | | | || | ||
Sbjct 196879 AGATTTCCCAAACAGTTTTATATAAATCTTTCAAGTCTTGAGGAACGTTTGGTAAGTCTT 196820
Query 37046 GAATAGAACCATTATG--TAACACAATTGTATTCTTT-ATGTCATTATTCCACATATTTC 37102
||| |||||||| || ||| ||| ||| ||| || || || ||| ||| |
Sbjct 196819 TAATGGAACCATTTTGAGTAATCAAAT---ATTGTTTCATACTATCATCCCAAATAC--C 196765
Query 37103 TACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATAC 37160
| | | | || | | || || |||||| || || || || || |||||||| ||
Sbjct 196764 CAGGTCGACCAAATCACGTAGTAAGTATGGATTGACGACTTGGAATTCACCAGATAAGAC 196705
Query 37161 TCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTG 37220
| | | || || || ||| |||||| | | ||||| | | | |||||
Sbjct 196704 ACGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACATTCATTGTACCCAAGAATTTG 196645
Query 37221 AGATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTATTTCTCAATCCATGTGTA 37278
|||||||| || || |||||||| || || | ||| | |||| || |||||| |
Sbjct 196644 GGATGTAGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAGT--TTCTTAACCCATGTTTG 196587
Query 37279 TTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTT--CTTTAACCACA 37336
||| ||| |||| | ||||||||| | | | ||| || | || |||||
Sbjct 196586 ACAATGTCCTTCTTTAAAGTGTCCCAATCCCACATACCAAATGGCTTAGCATT--CCACA 196529
Query 37337 TATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGT 37396
| || |||||| |||||| ||| || ||||| | | | | || ||| || |
Sbjct 196528 TGTCGAATTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAATATTTACCTT 196469
Query 37397 AAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTT 37456
||| ||||| ||| ||| || ||| || | ||||| || || |||||||||||||
Sbjct 196468 CCTTTTGAGCTAATTCACAAGAAGCTTCAAGGGTGGCATGGTAAATAGTTTCGAAAATTT 196409
Query 37457 GTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACAT 37516
| |||| | ||||| |||| ||| | || |||| | | || | ||| | ||
Sbjct 196408 GCTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCAGCATCATATAGGTAT 196349
Query 37517 CAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA---TCTAGACG 37573
| |||||||| ||||| || | | || ||||| ||| || ||||||| ||||| |
Sbjct 196348 CTGCCAAACCTTGAACCCCCAGGGCAATAGGTCTGTGTCTCATATTAGAGTTTCTAGCC- 196290
Query 37574 ATTCTATCACTGGATAATAATT 37595
||| |||||||||||| ||
Sbjct 196289 --TCTGGCACTGGATAATAGTT 196270
Score = 86.0 bits (94), Expect = 6e-12
Identities = 286/445 (64%), Gaps = 0/445 (0%)
Strand=Plus/Minus
Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065
|||| | ||| || || | ||| || | |||||| | ||||| |||| || ||||||
Sbjct 195844 CATCCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGGGCAGGGAACAAATCTC 195785
Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAG 38125
| | | | |||||| || || | | ||||| | | ||| ||||| || || |
Sbjct 195784 TTGCACGAATTTCTTCCTTACCATGAGTTTTTCTGATATCAACAAAGTCGAAGATGTCTG 195725
Query 38126 CGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAA 38185
| |||||||| || | ||| | | || || ||||| || | ||| || || | |
Sbjct 195724 CATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCA 195665
Query 38186 TATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGT 38245
|| | | |||||||| | | | | ||| || | | ||||| || | ||||
Sbjct 195664 CGTAACGTGCAGTGTTATTGAAGACACGGATCATGGGAATCAACCCATTTGAAGTACCGT 195605
Query 38246 TTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCAC 38305
| |||| | ||||||| || | | || ||||| | || | || | ||||
Sbjct 195604 TGGTACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCAC 195545
Query 38306 CTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGT 38365
||||| || || || | || || | ||| || || || | |||||||| || ||
Sbjct 195544 CTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGT 195485
Query 38366 CATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425
| ||||| || | | | |||||| |||||||||||| ||| || ||||| ||||
Sbjct 195484 CGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAA 195425
Query 38426 ATAATGTAGGAGATGCATGTATGAA 38450
||| || || || || || ||||
Sbjct 195424 ATAGAGTGGGGGAAGCGTGAGTGAA 195400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524507172000
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