Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq24 143 4e-29 >seq24 Length=351367 Score = 143 bits (158), Expect = 4e-29 Identities = 579/896 (65%), Gaps = 21/896 (2%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| |||||| ||| || || || ||| || |||||| || |||||||||| | Sbjct 16790 TGTTCCCCATCCAGTACCACGAGATCTGGCAATCGTACAAGCGTGCCGAGGCCTCCTTCT 16849 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| | ||| || |||| ||||||||||| | |||| ||| | | | ||| | Sbjct 16850 GGACTGCCGAGGAAATCGACTTGTCCAAGGACATCCACGACTGGAACAACAGAATGAACG 16909 Query 125116 AAACTGAGCGAGAGTTTATATCGCACA-TTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 ||| || || || || || || | | | |||||||| |||| |||||| || ||| Sbjct 16910 AAAACGAAAGATTCTTCATCTC-CAGAGTGCTTGCCTTCTTCGCCGCCTCCGACGGTATC 16968 Query 125175 GTCAACGACAA-TCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTG 125233 |||||||| || | || || | ||||| ||| | || || |||| | | Sbjct 16969 GTCAACGAAAACTTGGTCGAGA-ACTTCTCCACCGAGGTCCAGATCCCGGAGGCCAAGAG 17027 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 || ||||| ||||| ||| ||| |||||| | ||||| |||| ||||| |||| Sbjct 17028 TTTCTACGGGTTCCAGATCGCGATCGAGAACATCCACTCCGAAACCTACTCCTTGTTGAT 17087 Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAACGCAATCGACACGG 125352 |||| |||| || | || ||| | || | | | | || ||||| |||||||| Sbjct 17088 CGACACCTACA-TCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCATCGACACCA 17146 Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTT 125412 | || || | | ||||| |||||| || | |||||| | |||| | | | Sbjct 17147 TCCCAGAAATCTGCGAGAAGGCCGAATGGGCCCTTAGATGGATCCAGGACGCCGATGCCC 17206 Query 125413 CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTT 125472 || || || |||||||| || |||||| || | || || ||||||| || || | Sbjct 17207 TGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTCTCCGGGTCCT 17266 Query 125473 TTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACG 125532 | || ||||||| ||| | ||||| | || | |||||||| |||| | |||| Sbjct 17267 TCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTCTCCAACG 17326 Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACT 125592 | | || | ||||||| || | ||| ||||||||| | | || ||||| | Sbjct 17327 AACTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGTTG-TTCGC--CC 17383 Query 125593 ATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCG 125652 | || | || | || ||||| || ||| || || || ||||| |||| Sbjct 17384 ACTTGAAAAACAAG-CCGGACCCAGCCAT-----CGTCGAGAAAATCGTCACCGAGGCCG 17437 Query 125653 TGAGGATAGAACAAGAGTTTCTAAC-CGAATCCCTACCGGTCAGCATGATTGGCATGAAC 125711 | ||| |||||| || | || | || || | || ||| | || | || |||||| Sbjct 17438 TCGAGATCGAACAA-AGATACTTCCTAGACGCCTTGCCAGTCGCCTTGCTAGGTATGAAC 17496 Query 125712 TGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATT 125771 | | | ||| | | ||| | ||||| || ||||| | || || || || | Sbjct 17497 GCCGACTTGATGAACCAATACGTCGAGTTCGTCGCAGACAGACTCTTGGTCGCCTTCGGT 17556 Query 125772 GGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAG 125831 | ||| ||||| | | | || ||||| ||||||||| | ||| || | | Sbjct 17557 AACAAGAAGTACTACAAGGTCGACAACCCCTTCGATTTCATGGAAAACATTTCCTTGGCC 17616 Query 125832 GGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885 |||||||||||||| ||||| |||| ||| ||| ||| ||| || ||||||| Sbjct 17617 GGTAAGACCAACTTCTTCGAAAAGAGAGTCTCCGACTACCAAAAGGC--CGGTGTC 17670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058736838000