Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq14 100 3e-16
seq3 84.2 3e-11
>seq14
Length=538356
Score = 100 bits (110), Expect = 3e-16
Identities = 291/452 (64%), Gaps = 27/452 (6%)
Strand=Plus/Plus
Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869
|||||| || | |||| | |||||| ||| | ||| ||||| || | ||||||||
Sbjct 121436 TTGTTCCTTCAAGGCTTCAACATGATCCTTATACACATGCGCATCCCCCAAAGTATGAAT 121495
Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929
|| ||||| |||| |||||| || ||| |||||| | || || | ||||| ||
Sbjct 121496 GAACTCACCCGGTTCCATATCGACGACTTTAGCAATCATTCTGGTCAACAGGGCATATGA 121555
Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATA------ACAT-- 6981
|| | |||||| || ||||||| |||||||| || | || || ||||
Sbjct 121556 GGCAATATTAAATGGCACACCTAGCCCCATATCACAGGAACGCTGGTATAACAAACATGA 121615
Query 6982 ----------TGACAAGATAAAATATTGTCTATAG---------CATAAAATTGACACAA 7022
| || | | | | || ||| | | ||||||| || | ||
Sbjct 121616 AAGGCGAGGCTTACCACTTCCACTTTTCTCTTTGGGGAAACTGACATAAAACTGTGAAAA 121675
Query 7023 TACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAA 7082
| ||| ||||| |||||| | || || | ||| | |||||||||||| |||| |
Sbjct 121676 AATATGGCATGGTGGTAAAGCCATCTTGTCAAAATCTGCAGGATTCCAAGCACTCATGAT 121735
Query 7083 AATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTAT 7142
||| | |||||| | || |||||||||||||| ||||| | | ||||| ||
Sbjct 121736 AATTCTTCTATCGTAAGGGTTTGTTTTTAATTTGTGTATAACCTGCTTCAGCTGATCGAT 121795
Query 7143 ACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTG 7202
|| || || ||| | | || || | | || | || || ||||||||||||||
Sbjct 121796 GCCTTGTCCGGTATAGTCATCATCGCACGTCTTGTATTGGGCACCGAAATGTCTCCATTG 121855
Query 7203 AAACCCATAAATAGGACCTAAATCACCTTCTT 7234
|||||||||| || || | || ||| |||
Sbjct 121856 GAACCCATAAACGGGGCCCAGGTCTCCTACTT 121887
Score = 96.9 bits (106), Expect = 4e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 19358 CCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATT 19417
||| |||| ||||| || || |||||| | || |||||| || || |||||| |
Sbjct 261703 CCTCAAATCGGTGACAAATTCGCTTCTCGTCATGGTCAAAAGGGTACTATTGGTATCACA 261644
Query 19418 TATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAAC 19477
|||||| |||||||||||| ||||| ||| ||||| || || ||| | ||||| ||
Sbjct 261643 TATCGTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTACCAGATTTAATTATCAAT 261584
Query 19478 CCACATGCTTTTCCAAGTCGAATGAC 19503
|| |||||| ||||| ||| |||||
Sbjct 261583 CCTCATGCTATTCCATCTCGTATGAC 261558
>seq3
Length=553868
Score = 84.2 bits (92), Expect = 3e-11
Identities = 193/288 (67%), Gaps = 2/288 (1%)
Strand=Plus/Minus
Query 164794 GTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATT 164853
|| |||||||| | || ||||||| |||||||| || | ||||||||||| |
Sbjct 138780 GTAGTTAATCAACTACTGGCTAAAATGGATGGTGTTGATCAACTGAATAATATTTTGGTC 138721
Query 164854 GTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTA 164913
| ||||||||||| || ||||| || ||| |||| | ||||| || ||| ||||
Sbjct 138720 ATCGGTATGACCAATCGTAAAGATTTGATCGATATTGCTCTTTTACGTCCAGGTAGATTC 138661
Query 164914 GAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTT 164973
||| | | | ||||| ||||| ||| || |||| | || || ||||| | ||
Sbjct 138660 GAAGTTCAGGTTGAAATTCATTTACCGGACGAAAAAGGTAGACTGCAGATTTTTGACATT 138601
Query 164974 CATGTGGCTAAAATGAAATCCTGTGATAT-ATTATCTCCCGATGTAGATTTAAATAAAAT 165032
|| | ||||||| | | |||| || | | |||||| | ||| | || |
Sbjct 138600 CAAACGAAGAAAATGAGAGAAAATAATATGATGAGC-GACGATGTTAACTTAGCTGAACT 138542
Query 165033 AGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGT 165080
||| || |||||| |||| | ||||||||| | || || |||||
Sbjct 138541 AGCAGCTTTAACTAACAATTTTTCCGGTGCTGAAATTGAAGGTTTAGT 138494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871627580000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |