Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq33 120 5e-23 seq23 120 5e-23 >seq33 Length=196760 Score = 120 bits (132), Expect = 5e-23 Identities = 189/268 (71%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| ||| |||||||||||||||| ||||| ||||||||||| Sbjct 2896 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCTAT 2954 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| | Sbjct 2955 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 3014 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| |||||| |||| | | | || ||| || || || || || || Sbjct 3015 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCTGTCATCAGAGACTCTGTCACTTACACTGA 3074 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | |||||||| || || | ||| | || || || ||||| | ||||| Sbjct 3075 GCACGCTAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTACGCTTTGAAGAGACAAGG 3134 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | || ||||| || ||||| Sbjct 3135 TAGAACCTTATACGGTTTCGGTGGTTAA 3162 >seq23 Length=100447 Score = 120 bits (132), Expect = 5e-23 Identities = 189/268 (71%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | ||| ||| |||||||||||||||| ||||| ||||||||||| Sbjct 267 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCTAT 209 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| | Sbjct 208 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 149 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| |||||| |||| | | | || ||| || || || || || || Sbjct 148 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCTGTCATCAGAGACTCTGTCACTTACACTGA 89 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | |||||||| || || | ||| | || || || ||||| | ||||| Sbjct 88 GCACGCTAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTACGCTTTGAAGAGACAAGG 29 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | || ||||| || ||||| Sbjct 28 TAGAACCTTATACGGTTTCGGTGGTTAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075154284650