Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq19 138 1e-27 seq40 114 1e-20 seq24 89.7 5e-13 >seq19 Length=415998 Score = 138 bits (152), Expect = 1e-27 Identities = 171/232 (74%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| |||||||| || | ||||| | || | ||||| Sbjct 67758 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAGACTATCACTTTAGAGGTCGAATCTTCT 67699 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | || || ||||| ||||| ||||| || ||||| || ||| Sbjct 67698 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAA 67639 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946 || ||| | |||| | || |||||||| ||||||| ||||| ||||| |||||| Sbjct 67638 CAGAGATTGATTTTTGCAGGGAAACAACTGGAAGATGGTAGAACGCTGTCAG--ACTATA 67581 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 |||||||||| |||||||| | || ||||||||||||| ||||| || || Sbjct 67580 ACATTCAAAAGGAATCTACCCTTCACTTGGTCCTGAGACTAAGAGGTGGCAA 67529 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| ||||||| || | ||||| | || | ||||| Sbjct 68214 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACTATCACTTTGGAGGTCGAATCTTCT 68155 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | || || ||||| ||||| ||||| || ||||| || ||| Sbjct 68154 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAA 68095 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | |||| | || ||||| | ||||||| ||||| | || || ||| Sbjct 68094 CAGAGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTAGAACGCTGTCGGATTACAAC 68035 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| |||||||| | || ||||||| ||||| ||||| || Sbjct 68034 ATTCAAAAGGAATCTACCCTTCACTTGGTCCTAAGACTAAGAGGTGG 67988 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| | || || || | || ||| | || | |||| Sbjct 67986 ATGCAGATTTTTGTCAAAACTCTGACCGGTAAGACCATAACCTTGGAGGTTGAATATTCT 67927 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| ||||| || ||||| || ||| Sbjct 67926 GACACCATCGATAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 67867 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG-ACTATAA 26947 || || | |||| || || |||||||| ||||| | ||||| || | || | || || Sbjct 67866 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAA-CGCTATCGGATTACAA 67808 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||||| || ||| | || ||||||| || || ||||| || Sbjct 67807 CATTCAAAAAGAGTCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 67760 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || ||| | ||||| || | || || | || | ||||| Sbjct 68442 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 68383 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || ||||| | ||||| || || ||||| ||||| || ||||| || ||| Sbjct 68382 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 68323 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | |||| || || |||||||| ||||| | ||||| | || || ||| Sbjct 68322 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGATTACAAC 68263 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| ||||| ||| | || ||||||| || || ||||| || Sbjct 68262 ATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 68216 >seq40 Length=705427 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 || || || || || ||||| || | ||||| | ||| | ||||| |||||||| Sbjct 667915 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 667856 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | |||||| |||||| ||||||||||| || || || || ||||||||| | Sbjct 667855 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 667796 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957 || | | || || ||| | ||||| | ||||| | | |||||| ||||||||||| Sbjct 667795 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 667736 Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||| | ||| | ||| ||||| | ||||| || Sbjct 667735 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 667698 >seq24 Length=351367 Score = 89.7 bits (98), Expect = 5e-13 Identities = 369/572 (65%), Gaps = 24/572 (4%) Strand=Plus/Minus Query 119939 ACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAA 119998 ||| |||||||||||||| | |||||||||||| | || ||||||||| | | ||||| Sbjct 17370 ACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAA 17311 Query 119999 GCCGGGTAGAGCTCCTTTTTTCGAGTCTTTGATATAGTAGATTGCAGCAAAACTACCAGa 120058 ||||| | ||| ||||| || | || |||| | || || || || Sbjct 17310 ACCGGGCATCATACCTCTTTTC------TTCAACCAGAAGATGGAGGCGAAGGACCCGGA 17257 Query 120059 aaaaaaGACGCCTTCGACGATAGCAAAAGCGACCATGCGTTCGGCGAATGTGGCAGATTG 120118 || ||||| ||||||| | || || ||||||| | ||| |||| |||| Sbjct 17256 GAAGAAGACACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGGC 17197 Query 120119 ATTTTCGATCCATTTTTGAGCCCAAGCCGCCTTCTGCTTGACACTATCTAT-ATGCT--C 120175 | | ||||||| | | ||||| | ||||||| || | ||| ||| | | Sbjct 17196 GTCCTGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAGA---TTTCTGGGATGGTGTC 17140 Query 120176 GATCGCATTCAAAATCCTGTCGCATTCTTGGGGATCTTTAATGTATTCGACGA-CAAGAA 120234 ||| || || || | |||| ||| | ||| || || ||||| | ||| ||| || Sbjct 17139 GATGGCGTTGAACAAGAACTCGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAA 17080 Query 120235 TGTTATACATTTCCGTGTGAACACACTCAATGAATGTCTGTTGCGCATAGAAAAAACTAG 120294 | || |||| | ||| | ||| || |||| | | |||||| | | Sbjct 17079 GGAG-TAGGTTTCGGAGTGGATGTTCTCGATCGCGATCTGGAACCCGTAGAAACTCTTGG 17021 Query 120295 CTTCCAAT-TCGGG--CACGGCGGATTGCATGTGCTCGATGATGTTAGTGTTCACGATGA 120351 | ||| || || | ||| ||| | || ||||| | ||| ||| ||||| Sbjct 17020 CCTCCGGGATCTGGACCTCGGTGGAG---AAGTTCTCGACCAAGTTTTCGTTGACGATAC 16964 Query 120352 CGTCGGCGGCAGCGAAAAACGCGAGAACGTGCTTAAGA--AAAAATCGTTCTTTATCGTT 120409 |||||| ||| ||||| || || || || || ||| || |||| ||| || ||||| Sbjct 16963 CGTCGGAGGCGGCGAAGAAGGCAAGCACT--CTGGAGATGAAGAATCTTTCGTTTTCGTT 16906 Query 120410 CAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACATGTCGATCTCTTCGACTTTCCAGTG 120469 || | | |||||||| |||| | ||||||||||| |||||| || ||| | ||||| Sbjct 16905 CATTCTGTTGTTCCAGTCGTGGATGTCCTTGGACAAGTCGATTTCCTCGGCAGTCCAGAA 16846 Query 120470 ACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 | | | || ||||||||||||||||| Sbjct 16845 GGAGGCCTCGGCACGCTTGTACGATTGCCAGA 16814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662100836000