Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq19 98.7 9e-16 seq40 84.2 2e-11 >seq19 Length=415998 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || |||||||||||||||||||| || || | ||| || || || || || Sbjct 68246 GTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCTTCCAGTTGTTTACCA 68305 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || || | ||| ||||||||||| || ||||| ||||| |||||| |||| Sbjct 68306 GCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATTTTGGACTTG 68365 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | |||||| | || |||| || | |||| || ||||| || || || Sbjct 68366 ACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTACCAGTCAGTGTC 68425 Query 131218 TTTACGAAAATCTGCAT 131234 || |||||||| ||||| Sbjct 68426 TTGACGAAAATTTGCAT 68442 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||| ||||||||||||||||| | || | ||| || || || || || Sbjct 67790 GTGGACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCTTCCAGTTGTTTACCA 67849 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| | || || | ||| ||||||||||| || ||||| ||||| ||| || |||| Sbjct 67850 GCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGACTTG 67909 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | | || | || | ||| | ||| |||||||| |||||| Sbjct 67910 ACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTCTTACCGGTCAGAGTT 67969 Query 131218 TTTACGAAAATCTGCAT 131234 || || ||||||||||| Sbjct 67970 TTGACAAAAATCTGCAT 67986 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || || || || | ||| || |||||||||||||||||||| || || | || Sbjct 68003 AGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATCT 68062 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || | ||| || ||||| | || || | ||| ||||| ||||| || ||||| ||||| Sbjct 68063 TCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCC 68122 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 ||| || ||| | | || | || || | || |||| || | || | || Sbjct 68123 TGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGTGATAGTC 68182 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| ||||||||||| || ||||||||||| Sbjct 68183 TTACCAGTTAGAGTTTTGACAAAAATCTGCAT 68214 >seq40 Length=705427 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || |||||||||| || || ||||||||||||||||| ||| | Sbjct 667698 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 667757 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | ||| || | ||||| || || |||| || | || ||||| || ||| Sbjct 667758 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 667817 Query 131128 ATTCCTTCTTTGTC 131141 || ||||||||||| Sbjct 667818 ATACCTTCTTTGTC 667831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012504992000