Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq19 145 7e-30
seq40 134 1e-26
seq16 125 6e-24
seq14 109 5e-19
>seq19
Length=415998
Score = 145 bits (160), Expect = 7e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
|| |||||||| || || ||||| |||| ||||| | || || | || || || ||
Sbjct 68445 ACTATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCT 68386
Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| |||||||| | ||| |||||| ||||| ||||| ||||| || |||
Sbjct 68385 TCTGATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGAC 68326
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||| || | ||||| || || |||||| | ||||| | | | || || ||||||
Sbjct 68325 CAACAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGATTAC 68266
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| |||||||| |||||||| || || || || |||||||||||||| ||
Sbjct 68265 AACATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 68216
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || ||| |||||||||| |||| || | || || || | |||
Sbjct 67986 ATGCAGATTTTTGTCAAAACTCTGACCGGTAAGACCATAACCTTGGAGGTTGAATATTCT 67927
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| | || | ||| || ||| ||||| ||||| ||||| || |||||
Sbjct 67926 GACACCATCGA-TAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCA 67868
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| || | ||||| || || |||||| | ||||| | | | || | ||||||||
Sbjct 67867 ACAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCGGATTACAA 67808
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||||||| ||||| || || || || |||||||||||||| ||
Sbjct 67807 CATTCAAAAAGAGTCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 67760
>seq40
Length=705427
Score = 134 bits (148), Expect = 1e-26
Identities = 164/221 (74%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||||||||| ||||| ||||||| | ||||| || || |||||||| ||
Sbjct 667915 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 667856
Query 25068 GAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124
|| || || || | || | ||| ||||||||||| || |||||||||||||| |
Sbjct 667855 GA--CAATGTCAAATCCAAGATTCAA-GACAAAGAAGGTATCCCACCTGACCAACAAAGA 667799
Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184
| || ||||| || || ||||| ||||| | | | || || ||| ||||| ||||||
Sbjct 667798 TTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAA 667739
Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| |||||||| |||||||||| | || | ||||| ||
Sbjct 667738 AAGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 667698
>seq16
Length=189800
Score = 125 bits (138), Expect = 6e-24
Identities = 163/221 (74%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
||||| || |||||||| ||||| ||||||| | ||||| || || |||||||||||
Sbjct 50626 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 50685
Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124
|| || || ||| |||| | ||| ||||| ||||| || || ||||||||||| |
Sbjct 50686 GA--CAATGTCAAGTCAAAGATTCA-AGACAAGGAAGGTATCCCTCCTGACCAACAAAGA 50742
Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184
| || ||||| || || ||||| ||||| | | | || || || ||||| || |||
Sbjct 50743 TTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAA 50802
Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| |||||||| |||||||||| | || | ||||| ||
Sbjct 50803 AAGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 50843
>seq14
Length=538356
Score = 109 bits (120), Expect = 5e-19
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||||| |||||||| | || || | ||||| || || ||
Sbjct 529688 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCA 529629
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || || || ||| | || | ||| ||||| ||||| ||||||||||||
Sbjct 529628 GACACCATTGA--CAATGTCAAGTCTAAGATTCAA-GACAAGGAAGGTATTCCACCTGAC 529572
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | || ||||| || || ||||| ||||| | | ||| || || |||
Sbjct 529571 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 529512
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| || ||||| || ||||| |||| || || | || | ||||| ||
Sbjct 529511 AACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 529462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327735940750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |