Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq14 181 2e-40
seq19 170 4e-37
seq16 152 9e-32
seq40 143 5e-29
seq24 95.1 2e-14
>seq14
Length=538356
Score = 181 bits (200), Expect = 2e-40
Identities = 168/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||||| |||||||| ||||||||||| || || || | || || || ||
Sbjct 529476 CAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTC 529535
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| |||||||| |||||||||||
Sbjct 529536 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 529595
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| | |||||| || |||||||||| ||||| ||||| | ||| || ||
Sbjct 529596 TTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATAGT 529655
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || |||||
Sbjct 529656 CTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 529688
>seq19
Length=415998
Score = 170 bits (188), Expect = 4e-37
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || |||||||||||||| ||||| ||||| || || || || || |||||
Sbjct 67778 ACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCTTCC 67837
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| || || || ||||| || | || |||||||| || ||||| ||||||||||| ||
Sbjct 67838 AGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGG 67897
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| | ||||||| ||||||||||| | |||| || |||||||| ||||| ||
Sbjct 67898 ATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTCTTA 67957
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || ||||| || ||||||||
Sbjct 67958 CCGGTCAGAGTTTTGACAAAAATCTGCAT 67986
Score = 152 bits (168), Expect = 9e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || || || || ||||| ||||| ||||| || || || || ||||||||
Sbjct 68006 ACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATCTTCC 68065
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
||||| || || || || || | ||| |||||||| || ||||| ||||||||||| ||
Sbjct 68066 AACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCCTGG 68125
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||| || || |||||||| | ||||| || ||||| ||||| || ||
Sbjct 68126 ATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGTGATAGTCTTA 68185
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || ||||| || ||||||||
Sbjct 68186 CCAGTTAGAGTTTTGACAAAAATCTGCAT 68214
Score = 152 bits (168), Expect = 9e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||| || ||||| ||||| ||||| || || || || || |||||
Sbjct 68234 ACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCTTCC 68293
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| || || || ||||| || | || |||||||| || ||||||||||||||||| ||
Sbjct 68294 AGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 68353
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || | ||||||| ||||| || || | ||||| || ||||| || || || ||
Sbjct 68354 ATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTA 68413
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || ||||||||||| || |||||
Sbjct 68414 CCAGTCAGTGTCTTGACGAAAATTTGCAT 68442
Score = 140 bits (154), Expect = 6e-28
Identities = 172/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286
||||||| || || | || | || |||||||| || || || || ||||| |||||||
Sbjct 67524 TTTAATTGCCACCTCTTAGTCTCAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTAT 67583
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
| || || || || || |||||||| | || ||||| || || || | ||| |||||||
Sbjct 67584 AGTCTGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGT 67643
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406
| || ||||| ||||||||||| || ||||| ||| || || |||||||| | |
Sbjct 67644 CTGGAGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAG 67703
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| || || || ||||| || || || || | || ||||| || || |||||
Sbjct 67704 ATTCGACCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 67758
>seq16
Length=189800
Score = 152 bits (168), Expect = 9e-32
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || |||| ||||| || ||||||||||| || || || | || || || ||
Sbjct 50829 CAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTC 50770
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| || || || |||||||||||
Sbjct 50769 TTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTGTC 50710
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||||| |||||| || || ||||| | ||||| |||||||| ||||||||
Sbjct 50709 TTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 50650
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | || ||||| ||
Sbjct 50649 CTTACCAGTCAAAGTTTTGACAAA 50626
>seq40
Length=705427
Score = 143 bits (158), Expect = 5e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || |||| ||||| || ||||| ||||| || ||||| | || || || ||
Sbjct 667712 CAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCGTC 667771
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || ||||| |||||
Sbjct 667772 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTC 667831
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||||||||| | ||||| || |||||||| | ||||| ||||| | ||||||||
Sbjct 667832 TTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATGGT 667891
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||||| |||||
Sbjct 667892 CTTACCAGTCAAAGTCTTAACGAA 667915
>seq24
Length=351367
Score = 95.1 bits (104), Expect = 2e-14
Identities = 282/431 (65%), Gaps = 8/431 (2%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||| ||||| || || || | ||||||||||||| ||| || |
Sbjct 17673 CATGACACCGGCCTTTTGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGC 17614
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
| ||||||| |||||||| || |||||||| ||| | | | ||| || |||
Sbjct 17613 CAAGGAAATGTTTTCCATGAAATCGAAGGGGTTGTCGACCTTGTAGTACTTCTTGTTACC 17554
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
|| || || | | ||| || |||||||||| ||| ||| |||||| ||| | |||
Sbjct 17553 GAAGGCGACCAAGAGTCTGTCTGCGACGAACTCGACGTATTGGTTCATCAAGTCGGCGTT 17494
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGT-CCTT--TTCGTTGGCGAC 10171
||| || | || | | || | |||||| | ||||| ||| |||| | ||||
Sbjct 17493 CATACCTAGCAAGGCGACTGGCAAGGCGTC---TAGGAAGTATCTTTGTTCGATCTCGAC 17437
Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATA 10231
|| || |||||| ||| || | | | || | ||||||| | | | | |
Sbjct 17436 GGCCTCGGTGACGATTTTCTCGACGATGGCTGGGTCCGGCTTGTTTTTCAAGTGGGCGAA 17377
Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291
|| | |||| | ||| | || ||||| | || ||| | |||||||| ||
Sbjct 17376 CAACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAA 17317
Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351
|| ||||||||| | || | || || |||||| |||| | ||| ||||||||
Sbjct 17316 GGTCAAACCGGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGA 17257
Query 10352 GAACAGAAGAC 10362
|| |||||||
Sbjct 17256 GA--AGAAGAC 17248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621823986000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |