Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq19 113 1e-19 seq14 93.3 1e-13 >seq19 Length=415998 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || || || || | |||| ||| ||| ||||| || || || || | Sbjct 68216 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGAC 68275 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| | |||||||| | |||||| || ||||| |||| | |||||| || Sbjct 68276 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 68335 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || ||||||||||| | || ||||| || |||| ||| ||||| || Sbjct 68336 ATGCCTTCCTTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACC 68395 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || ||||| || ||||| ||||||||||| || ||||| Sbjct 68396 TCCAAAGTAATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCAT 68442 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || || || || | |||| ||| |||||||| || || || || | Sbjct 67760 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGAT 67819 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| | |||||||| | |||||| || ||||| |||| | |||||| || Sbjct 67820 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 67879 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || | || ||||| || || | || |||| || Sbjct 67880 ATACCTTCCTTGTCCTGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACC 67939 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || ||||| ||||||||||| ||||| || |||||||| Sbjct 67940 TCCAAGGTTATGGTCTTACCGGTCAGAGTTTTGACAAAAATCTGCAT 67986 >seq14 Length=538356 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||| | | || | |||||||| ||||| || || || ||| Sbjct 529498 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAG 529557 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||||| | ||| || ||||| || || || || || | || || || Sbjct 529558 ATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTAGACTTGACATTG 529617 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || ||||| ||||| || || || ||||| ||||| | |||||||||| Sbjct 529618 TCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACG 529677 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 529678 AAAATTTGCAT 529688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653644283900