Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5 168 8e-37 seq3 105 8e-18 >seq5 Length=188055 Score = 168 bits (186), Expect = 8e-37 Identities = 770/1206 (64%), Gaps = 30/1206 (2%) Strand=Plus/Minus Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162 |||||| || || || || |||||||| || ||||| || || | || || |||||||| Sbjct 52551 CCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGGAAGGTTTCGTATGG 52492 Query 114163 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 114222 ||| || | || | || | || || | || || || ||||| || ||||| Sbjct 52491 GCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGGTACATGGTTTCAAA 52432 Query 114223 AATGCGAGCATTCATT--GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATA 114280 || | ||| | | || | || || ||||| || || | | || |||| || Sbjct 52431 GATTTGTATATTTAGTAAGCGT--GCTTCTTCGGAGTCGAATGGTAAACGCAACAACATG 52374 Query 114281 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTT 114340 || || || | |||||||||||| | |||| || | |||||||||||||| || Sbjct 52373 AAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTCATATTAGATCTT 52314 Query 114341 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 114400 | || ||| || |||||| | || | || ||||| | |||| || |||| | Sbjct 52313 CTTGCTTCCTCGACAGGATAATAGTTACGGTCAATAACGTTGTTTAAGTTACGAGTGATA 52254 Query 114401 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT------CTTCA--- 114451 || || | |||||||| ||||||| | | | | | | ||| | ||||| Sbjct 52253 ACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATATGTAGAAGTTTTGCCGTCTTCAGAT 52194 Query 114452 -TTGACATACTTA--GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 || ||| | || | || | || |||| ||||| |||| |||||||| | Sbjct 52193 GTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGA 52134 Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568 | | ||| || | |||||| ||||| || || ||| || |||||||||||| Sbjct 52133 GCGGAGTATTCAACAATTTCACAGCACAAGTTAGACGACTTGATAACACCCAAGTTCTTT 52074 Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628 || || || || ||||||| ||||||||||||| | | || || || || |||||| Sbjct 52073 TGGTTGGATTTCCTGTTACAAGCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCGTT 52014 Query 114629 TGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC 114688 || | | | |||| | ||| | | ||| | ||| || | || || Sbjct 52013 TGTGCTTCCAATATAGAGTACCACAATTTTTGGGCCTTGATAGTC---TTACCACGGCCT 51957 Query 114689 TCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACG--GCCTCTGAGAGCC 114746 || | ||||| || || ||||||||||| || ||||| | | | || | |||| Sbjct 51956 TCTTTTTCGTAACGGGTATATAGGGCTTCAAATTCGTCACCGTAGCAGTCACTTA-AGCC 51898 Query 114747 CTGGTGCCTTATCTGGGC-AGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805 ||| ||| || | || |||| | || ||| || || || |||||||||||| Sbjct 51897 -TGGAGCCG-ATGTAGGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATG 51840 Query 114806 AAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 114865 || || || || | ||| ||||||| ||| | ||| | || |||||| | || Sbjct 51839 AAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCG 51780 Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925 ||||| | | || | ||||| | |||||| |||||||| || |||| || | Sbjct 51779 TGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGA 51720 Query 114926 GCGATTG-ACCCCTTACGACG--ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAAT 114982 || | | ||| | | |||| |||||| ||||| | || ||| || || Sbjct 51719 GCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAG 51660 Query 114983 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTA 115042 || || | ||| ||||| | || | ||| || || || || ||| ||| Sbjct 51659 ACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCG 51600 Query 115043 TTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 115102 | || | | | || || || | ||||||||| || || || || || || Sbjct 51599 GTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCA 51540 Query 115103 CACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAG 115162 || ||| | | | || ||||||| || || || || ||| |||| |||| | ||||| Sbjct 51539 CATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAA 51480 Query 115163 CAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATG 115222 ||| |||||||| ||| ||||||||||||||||||| | ||||| | ||||| | Sbjct 51479 CAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTA 51420 Query 115223 AACATACCTT-GGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTG 115281 || || || |||||||| | ||||| || | |||| ||||| || ||||| Sbjct 51419 AAG-TATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTG 51361 Query 115282 AATACC 115287 |||||| Sbjct 51360 AATACC 51355 >seq3 Length=553868 Score = 105 bits (116), Expect = 8e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 160691 CCAGTAGGTGTCTACGGTCGCGTGGCACCAAGATCTGGTCTCGCTGTGAAGAGTGGTATC 160750 ||||| ||| ||||||| | | || |||||||| || || || ||||| | ||||| Sbjct 462686 CCAGTCGGTACCTACGGTAGAATCGCGCCAAGATCAGGCCTAGCAGTGAAAAACGGTATT 462745 Query 160751 CAAGTTGGTGCGGGTGTTGTGGATCCAGACTACACAGGTGAAGTCAAAGTCGTTCTCTTC 160810 ||| ||||| |||||||| || ||||||||| ||||||||||| || | | || Sbjct 462746 CAAACGGGTGCTGGTGTTGTCGACAGAGACTACACCGGTGAAGTCAAGGTTATCTTATTT 462805 Query 160811 AATCACGGGCACACAGATTTCCAAATCAAAAGGGGGGATCGCATCGCGCAACTCATCTTA 160870 ||||| || | |||||| ||||||| || ||||| ||||| ||| | ||||| Sbjct 462806 AATCATTCACAGAAGGATTTCGCGATCAAAAAAGGTGATCGTATCGCCCAATTGATCTTG 462865 Query 160871 GAGAGG 160876 || ||| Sbjct 462866 GAAAGG 462871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353226654000