Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq16 105 7e-18
seq40 104 2e-17
seq19 98.7 1e-15
seq14 87.8 2e-12
>seq16
Length=189800
Score = 105 bits (116), Expect = 7e-18
Identities = 158/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| |||||||||| | || |||||||| ||||||||||| |
Sbjct 50843 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 50784
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||||| | |||||||| |||||
Sbjct 50783 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGG 50724
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | |||| || |||| || | ||||| | || || |
Sbjct 50723 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 50666
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| |||||| ||||||
Sbjct 50665 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 50625
>seq40
Length=705427
Score = 104 bits (114), Expect = 2e-17
Identities = 157/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| |||||||||| | || ||||||||||||||||||||| |
Sbjct 667698 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 667757
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 667758 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 667817
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||||||||| ||| | || | ||| |||| || | |||||| | || || |
Sbjct 667818 ATACCTTCTTTGTC-TTGAATCTTGGATTTGACATTG-TCAATGGTGTCAGAAGATTCAA 667875
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605
| || | || | || |||||||||| ||| || || ||
Sbjct 667876 CTTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 667915
>seq19
Length=415998
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||| |||||||||||||| || | || | ||| || ||||||||||| |
Sbjct 67793 GACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCG 67852
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || | | ||||||||||||||| |||||||| ||||| ||| || || |
Sbjct 67853 AAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGACTTGACG 67912
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | || ||||| | || | || ||||| |||||||||||
Sbjct 67913 TTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTCTTACCGGTCAGAGTTTTG 67972
Query 138601 ACAAAAATCTGCAT 138614
||||||||||||||
Sbjct 67973 ACAAAAATCTGCAT 67986
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||||||||||||||| || || || | || || | |||||||| | |
Sbjct 68021 GATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATCTTCCAACTGTTTACCTGCA 68080
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || | | ||||||||| ||||| |||||||| ||||| ||| || || | |
Sbjct 68081 AAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACA 68140
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
|||| | | |||||| | || || ||||| | || | || |||||||| ||||||||
Sbjct 68141 TTGT-CTATGGTGTCAGAAGATTCGACCTCCAAAGTGATAGTCTTACCAGTTAGAGTTTT 68199
Query 138600 TACAAAAATCTGCAT 138614
||||||||||||||
Sbjct 68200 GACAAAAATCTGCAT 68214
Score = 93.3 bits (102), Expect = 4e-14
Identities = 139/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| |||||||||||||| ||||| || || | || || |||||||| || | |
Sbjct 67565 GATTCCTTTTGAATGTTATAGTCTGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCA 67624
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAA 138539
| || | | ||||||||| ||||| |||||||| ||||| ||| || | || |
Sbjct 67625 AAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACA 67684
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | |||||| | || || ||||| | || | || |||||||| | ||||||
Sbjct 67685 TTG-TCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTT 67743
Query 138600 TACAAAAATCTGCAT 138614
|||||||| |||||
Sbjct 67744 GACAAAAATTTGCAT 67758
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||||||||||||||| || || || | ||| || ||||||||||| |
Sbjct 68249 GATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCTTCCAGTTGTTTACCAGCG 68308
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || | | ||||||||||||||| || ||||| ||||| |||||| || |
Sbjct 68309 AAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATTTTGGACTTGACG 68368
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | || || | || || ||||| | || | || ||||||||||| || ||
Sbjct 68369 TTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTCTTACCAGTCAGTGTCTTG 68428
Query 138601 ACAAAAATCTGCAT 138614
|| ||||| |||||
Sbjct 68429 ACGAAAATTTGCAT 68442
>seq14
Length=538356
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || |||| | ||||||||||| ||||||||||| |
Sbjct 529462 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 529521
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 529522 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 529581
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | || | || |||| || | |||||| | || || |
Sbjct 529582 ATACCTTCCTTGTC-TTGAATCTTAGACTTGACATTG-TCAATGGTGTCTGAAGATTCAA 529639
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | || ||||| || | ||| || || ||||| |||||
Sbjct 529640 CTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 529688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262089836000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |