Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 233 2e-56 seq3 82.4 9e-11 >seq5 Length=188055 Score = 233 bits (258), Expect = 2e-56 Identities = 900/1389 (65%), Gaps = 50/1389 (4%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| || | ||||| | ||||| | ||||| || || || | ||||| | | | Sbjct 51325 CCACAACACTTAATCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCT 51384 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTT 111730 | || || || || |||||||| | || || | ||||| | ||||| | || Sbjct 51385 CTAGAAACCTATAACTTGATGTCCC-TAAAATACTTTACTCACGCCTCTCCAACTTTATT 51443 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||||||||||||||||| || ||||||||| |||||||| |||||| ||||| || Sbjct 51444 CAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGA 51503 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 ||| || | || || |||| |||| | | |||||||| || || || ||||| Sbjct 51504 TTCCATTGAAGGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGG 51563 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910 |||||| || | || || || | | | || | | ||| ||| ||||| || Sbjct 51564 TGGTATTGGTCTACATATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAA 51623 Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970 || || | || | ||||| ||| | || || || ||| ||| || || ||||| Sbjct 51624 CGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGT 51683 Query 111971 AAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGT----CTATCTT--GAGCCATGGCA 112024 |||| | ||| | |||| || || || | |||| || ||||||||||| Sbjct 51684 TGACCAGGGTGG---TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCA 51740 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||| |||||| | || ||| | || | | || || ||| | || || || || Sbjct 51741 CGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TG 51799 Query 112085 CC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 | | ||| | ||| | ||||| ||| |||| ||||| ||||||||| | || || || | Sbjct 51800 CGAGAGATTTATTCCCAGCTCTATGGGTTCCCGATCTTTTCATGAAGCGTGTCGAAGAAA 51859 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAA-GGCACCCGGTCTCTCCGATGCCGTGGGT 112202 |||| |||| || | || | ||| ||| ||| || || | || | ||| Sbjct 51860 ACGGCACTTGGACTTTATTCTCTCCT-ACATCGGCTCCAGGCTTAAGTGACTGCTACGGT 51918 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTG 112262 || || ||||||||||| || || ||||| ||||| | || | | ||| | Sbjct 51919 GACGAATTTGAAGCCCTATATACCCGTTACGAAAAAGAAGGCCGTGGTAA---GACTAT- 51974 Query 112263 CCAGCTGCCGATG---TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | || ||| | ||||| | |||| | | | ||||| || ||||||||||| Sbjct 51975 CAAG--GCCCAAAAATTGTGGTACTCTATATTGGAAGCACAAACGGAAACTGGTACACCC 52032 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | | | ||||||| || || |||||| || || |||||||| |||||||| ||| Sbjct 52033 TTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTATC 52092 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 ||| || ||| | || ||||| | |||| | | ||||||||| ||||| Sbjct 52093 AAGTCGTCTAACTTGTGCTGTGAAATTGTTGAATACTCCGCTCCAGATGAGACTGCTGTT 52152 Query 112440 TGTAACCTCGCATCAATCGCTCTCCC--CAAGTATGTGGATCC-----AGA-GACAAAG- 112490 |||||| | || || | ||| | || || ||| || | | ||| | |||| Sbjct 52153 TGTAACTTGGCTTCTGTTGCTTTGCCAGCATTTAT-TGAAACATCTGAAGACGGCAAAAC 52211 Query 112491 ----ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAA 112546 |||| | | | |||| || || ||| || | ||| | |||| ||| |||| Sbjct 52212 TTCTACATATAACTTCAAAAAGCTACATGAAATTTCTAAAGTTATCACTCGTAACTTAAA 52271 Query 112547 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 112606 || |||||||| | || | ||| || || ||| || | | ||||||||||||||| Sbjct 52272 CAACGTTATTGACCGTAACTATTATCCTGTCGAGGAAGCAAGAAGATCTAATATGAGACA 52331 Query 112607 CCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGC---CA 112663 | | || |||| | | |||||||||||| | || || ||||| |||| || | Sbjct 52332 CAGGCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACACTTTCAT--GTTGTTGCGTTTA 52389 Query 112664 CGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCA 112723 | |||| || ||||| ||||| | | ||| | || ||||| || ||||| || Sbjct 52390 C-CATTCGACTCCGAAGAAGCACGCTTACTAAATATACAAATCTTTGAAACCATGTACCA 52448 Query 112724 CGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 112783 || | | || || || ||| | || | ||||| ||||| |||||||| | Sbjct 52449 TGCTTCCATGGAAGCCTCTTGTGAGCTAGCTCAAAGAGATGGCCCATACGAAACCTTCCA 52508 Query 112784 GGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT 112843 || ||||||||||| ||||| | |||||||| || |||||||| | | | | Sbjct 52509 AGGCTCTCCAGCTTCTCAAGGTATACTTCAATTCGACATGTGGGACGAAAAACCTTACGG 52568 Query 112844 TCACTACGACTGGGACGCTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTC 112902 | | || ||||| || | || || | ||||| | || | ||| || | ||| || Sbjct 52569 TATGTGGGATTGGGATACT-TTGAGAAATGACATCATGAAGCATGGTGTTAGAAAC--TC 52625 Query 112903 TTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 112960 ||| |||||||| ||||| || || ||||| | || || || ||| | || || || Sbjct 52626 TTTGACCATGGCACCTATGCCTACTGCATCCACTTCCCAGATTTTAGGTTACAACGAGTG 52685 Query 112961 CTTTGAACC 112969 || ||||| Sbjct 52686 TTTCGAACC 52694 >seq3 Length=553868 Score = 82.4 bits (90), Expect = 9e-11 Identities = 113/157 (72%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 163559 GCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCGGGTGTTATTGAT 163618 |||||| |||| || || || |||||| ||||||| ||| ||||| |||||| | || Sbjct 462710 GCGCCAAGATCAGGCCTAGCAGTGAAAAACGGTATTCAAACGGGTGCTGGTGTTGTCGAC 462769 Query 163619 CCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACAAAGACTTTGAG 163678 |||||||| ||||||||||| || | | || |||||| | | || || || | | Sbjct 462770 AGAGACTACACCGGTGAAGTCAAGGTTATCTTATTTAATCATTCACAGAAGGATTTCGCG 462829 Query 163679 GTAAAGAGGGGGGAGCGCATCGCACAACTTGTTCTTG 163715 | || | || || || ||||| ||| ||| ||||| Sbjct 462830 ATCAAAAAAGGTGATCGTATCGCCCAA-TTGATCTTG 462865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742012036000