Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq5 181 1e-40
seq17 140 4e-28
>seq5
Length=188055
Score = 181 bits (200), Expect = 1e-40
Identities = 903/1428 (63%), Gaps = 34/1428 (2%)
Strand=Plus/Minus
Query 109714 TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGT 109773
||||| || ||||||||||| || || || ||| ||||| | || |||
Sbjct 52751 TTGACGACTTGAAATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACTGGT 52692
Query 109774 TCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATG 109833
||||||||||| |||| |||| || || | |||||| || || ||||| || ||||||
Sbjct 52691 TCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCCATG 52632
Query 109834 AGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAA 109893
| | ||||| | ||| | | || | | | | || | |||||||| |
Sbjct 52631 GTCAAAGAGTTTCTAACACCATGCTTCATGATGTCATTTCTCAAAGTATCCCAATCCCAC 52572
Query 109894 CGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCA 109953
||| ||| || || |||||||| || |||||||| ||| | || |||
Sbjct 52571 ATACCG-TAAGGTTTTTCG-----TCCCACATGTCGAATTGAAGTATACCTTGAGAAGCT 52518
Query 109954 GGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCT 110013
||||| || | ||| | ||||| | || || | || | ||| | || || ||
Sbjct 52517 GGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCC 52458
Query 110014 AGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAG 110073
| | ||||| ||||| || ||||| || || ||| | | ||| | ||||| ||
Sbjct 52457 ATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAG 52398
Query 110074 TCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATG 110133
||||| || | || | | || || || || | ||| || ||||| | | ||||
Sbjct 52397 TCGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATC 52338
Query 110134 GGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATG 110193
|| | || |||| ||||| | || || || || || ||| |||| ||||| ||
Sbjct 52337 GGCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAATA 52278
Query 110194 ACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAG---TTTGTCGTAATC- 110249
|| || | || || | | || | |||||||| || |||| || ||
Sbjct 52277 ACGTTGTTTAAGTTACGAGTGATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATAT 52218
Query 110250 ---GAACGTTTT--CGTCTCCTTAT--TGACATATTTG--GGGAGAGCAATAGACGCAAG 110300
||| ||||| ||||| | || | ||| || || | ||||| ||| || |
Sbjct 52217 GTAGAA-GTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAA 52159
Query 110301 ATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGA 110360
|| || |||| |||||| ||| ||| |||||| | |||||| |||||||| ||
Sbjct 52158 GTTACAAACAGCAGTCTCATCTGGAGCGGAGTATTCAACAATTTCACAGCACAAGTTAGA 52099
Query 110361 ACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAG 110420
||| || |||||||||||||| || || ||||| ||| || |||||||| || |
Sbjct 52098 CGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAAC 52039
Query 110421 CATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGC 110480
| | || |||||||||||||| |||| | | || | | ||| | | |||
Sbjct 52038 AACAAAGGGTGTACCAGTTTCCGTTTGTGCTTCCAATATAGAGTACCACAATTTTTGGGC 51979
Query 110481 GGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTC 110540
|| ||| ||| | | ||||| | ||||| ||| || | | | ||||||||
Sbjct 51978 CTTGATAGTC---TTACCACGGCCTTCTTTTTCGTAACGGGTATATAGGGCTTCAAATTC 51922
Query 110541 CTGTCCGTACACATCAGAAAGACCCTTCGCCT-TGTCGGGACAGAAGAGGGACCAATTTC 110599
| ||||| ||| | || ||| ||| || | |||| | | |||| | |
Sbjct 51921 GTCACCGTAGCAGTCACTTAAGCCTGGAGCCGATGTAGG-AGAGAATAAAGTCCAAGTGC 51863
Query 110600 CACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC 110659
| || || || | ||||||||| || || |||| ||| | || | ||| | || |
Sbjct 51862 CGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTC 51803
Query 110660 GGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCG 110719
||| ||||| | ||| || || | | || | ||||| | |||||| |
Sbjct 51802 TCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAG 51743
Query 110720 AGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACGACCCGCCTGGT 110773
||||||||| || | ||| | ||| | || || ||| || |||| ||||
Sbjct 51742 CGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCC---TGGT 51686
Query 110774 TAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGAC 110833
|||||| || || ||| |||||||| | || ||||||||| | || | || |
Sbjct 51685 CAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCC 51626
Query 110834 CATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATAC 110893
| || ||||| ||| || | |||||||||| ||| ||||| | ||||||||
Sbjct 51625 CGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATAC 51566
Query 110894 CACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCG 110953
|||| || || ||| ||||| || | | || | || ||||| ||||| |
Sbjct 51565 CACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGG 51506
Query 110954 AATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCAT 111013
|||| |||| | |||| ||| || || || ||||| ||||| || || || || |
Sbjct 51505 AATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGT 51446
Query 111014 TGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGA 111073
|||| | || || | || ||| | || | |||||||| ||| || || || |
Sbjct 51445 TGAATAAAGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTA 51386
Query 111074 GTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGA 111121
| |||| | | | |||||||||||| | ||| |||| |||||
Sbjct 51385 GAGCGGCCTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATGA 51338
>seq17
Length=290845
Score = 140 bits (154), Expect = 4e-28
Identities = 503/778 (65%), Gaps = 23/778 (3%)
Strand=Plus/Minus
Query 110373 ACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGT 110432
||||||||| | ||| || | || ||| || || || || || | |||| |||| ||
Sbjct 196068 ACCCAAGTTTTGCTGGTTGGTCTTTCTGTTACAAGCGTCTTTGTAAACCATGAATGGCGT 196009
Query 110433 ACCAGTTTCCGTCTGTGACTTGAGA-ATGGCCTTCCATACATCGGCGGCGGGGACAGTTG 110491
||| ||||| || |||| |||| | ||||| | ||| || | ||| || |||
Sbjct 196008 ACCGGTTTCTGTTTGTG-CTTGTAAGATGGCGTACCACACTTTTTGGGCCTTGATGGTT- 195951
Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551
||| | ||||||| ||||| |||||| | || || ||||| | || | |
Sbjct 195950 --TTACCACGACCTTCTCTTTCGTAACGGGTGTATAGCTCTTCGAATTCTTCACCCCAAA 195893
Query 110552 CATCAGAAAGACCCTTCGC----CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCC 110607
| || | ||| || |||| | | || |||| ||| ||| ||||
Sbjct 195892 CGTCGTCCAAACCTGGGGCAGAACTTGGTG----AAAATAGGGTCCAGGCCCCATCCTCT 195837
Query 110608 TCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGA 110667
|| || | ||||||||| || ||||||||||| | || | ||| | || | ||||
Sbjct 195836 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGGGCAGGGAACAAATCTCTTGCACGA 195777
Query 110668 GCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCAT 110727
||||| | ||| || | | | || | |||||| | ||| || | ||||||
Sbjct 195776 ATTTCTTCCTTACCATGAGTTTTTCTGATATCAACAAAGTCGAAGATGTCTGCATGCCAT 195717
Query 110728 GGTTCGA-GATA--GACA---GCGATGGATCCCTTACGACGACCCGCCTGGTTAACATAG 110781
|| || | || | | || || || || ||| || ||| |||| || ||
Sbjct 195716 GGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCT---TGGTCCACGTAA 195660
Query 110782 CGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTA 110841
||||| ||| ||||||||| | || ||| ||||| | |||| || ||| || |||
Sbjct 195659 CGTGCAGTGTTATTGAAGACACGGATCATGGGAATCAACCCATTTGAAGTACCGTTGGTA 195600
Query 110842 CCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCC 110901
|| ||| || ||| |||||| | || |||||| | ||||| |||||| ||
Sbjct 195599 CCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCA 195540
Query 110902 CACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCC 110961
||| ||| ||||||||| | | || | |||||||| || || || || ||
Sbjct 195539 GTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGTCGTCC 195480
Query 110962 TTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGT 111021
|| ||||||| || || ||||||||||| ||||| | ||||| || ||||| || ||
Sbjct 195479 TTCATGGCAATCAGGAAACAAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAAATAGA 195420
Query 111022 GTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAG 111081
|| || | || ||| |||| | |||||| |||||| || | || ||||
Sbjct 195419 GTGGGGGAAGCGTGAGTGAAGTATCTCAATGACATCAAGTTGTAAGTCTTCAGCACGGAC 195360
Query 111082 GGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTT 111138
| || ||||||| ||||| | ||| || ||||||| || || ||| || ||||
Sbjct 195359 TCGATGTCGCTACCGTGGATACCCAGGGCCACACGCATGACCAGATGTTGGGGACGTT 195302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975631890000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |