Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5 181 1e-40 seq17 140 4e-28 >seq5 Length=188055 Score = 181 bits (200), Expect = 1e-40 Identities = 903/1428 (63%), Gaps = 34/1428 (2%) Strand=Plus/Minus Query 109714 TTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGT 109773 ||||| || ||||||||||| || || || ||| ||||| | || ||| Sbjct 52751 TTGACGACTTGAAATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACTGGT 52692 Query 109774 TCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATG 109833 ||||||||||| |||| |||| || || | |||||| || || ||||| || |||||| Sbjct 52691 TCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCCATG 52632 Query 109834 AGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAA 109893 | | ||||| | ||| | | || | | | | || | |||||||| | Sbjct 52631 GTCAAAGAGTTTCTAACACCATGCTTCATGATGTCATTTCTCAAAGTATCCCAATCCCAC 52572 Query 109894 CGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCA 109953 ||| ||| || || |||||||| || |||||||| ||| | || ||| Sbjct 52571 ATACCG-TAAGGTTTTTCG-----TCCCACATGTCGAATTGAAGTATACCTTGAGAAGCT 52518 Query 109954 GGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCT 110013 ||||| || | ||| | ||||| | || || | || | ||| | || || || Sbjct 52517 GGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCC 52458 Query 110014 AGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAG 110073 | | ||||| ||||| || ||||| || || ||| | | ||| | ||||| || Sbjct 52457 ATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAG 52398 Query 110074 TCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATG 110133 ||||| || | || | | || || || || | ||| || ||||| | | |||| Sbjct 52397 TCGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATC 52338 Query 110134 GGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATG 110193 || | || |||| ||||| | || || || || || ||| |||| ||||| || Sbjct 52337 GGCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAATA 52278 Query 110194 ACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAG---TTTGTCGTAATC- 110249 || || | || || | | || | |||||||| || |||| || || Sbjct 52277 ACGTTGTTTAAGTTACGAGTGATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATAT 52218 Query 110250 ---GAACGTTTT--CGTCTCCTTAT--TGACATATTTG--GGGAGAGCAATAGACGCAAG 110300 ||| ||||| ||||| | || | ||| || || | ||||| ||| || | Sbjct 52217 GTAGAA-GTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAA 52159 Query 110301 ATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGA 110360 || || |||| |||||| ||| ||| |||||| | |||||| |||||||| || Sbjct 52158 GTTACAAACAGCAGTCTCATCTGGAGCGGAGTATTCAACAATTTCACAGCACAAGTTAGA 52099 Query 110361 ACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAG 110420 ||| || |||||||||||||| || || ||||| ||| || |||||||| || | Sbjct 52098 CGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAAC 52039 Query 110421 CATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGC 110480 | | || |||||||||||||| |||| | | || | | ||| | | ||| Sbjct 52038 AACAAAGGGTGTACCAGTTTCCGTTTGTGCTTCCAATATAGAGTACCACAATTTTTGGGC 51979 Query 110481 GGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTC 110540 || ||| ||| | | ||||| | ||||| ||| || | | | |||||||| Sbjct 51978 CTTGATAGTC---TTACCACGGCCTTCTTTTTCGTAACGGGTATATAGGGCTTCAAATTC 51922 Query 110541 CTGTCCGTACACATCAGAAAGACCCTTCGCCT-TGTCGGGACAGAAGAGGGACCAATTTC 110599 | ||||| ||| | || ||| ||| || | |||| | | |||| | | Sbjct 51921 GTCACCGTAGCAGTCACTTAAGCCTGGAGCCGATGTAGG-AGAGAATAAAGTCCAAGTGC 51863 Query 110600 CACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC 110659 | || || || | ||||||||| || || |||| ||| | || | ||| | || | Sbjct 51862 CGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTC 51803 Query 110660 GGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCG 110719 ||| ||||| | ||| || || | | || | ||||| | |||||| | Sbjct 51802 TCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAG 51743 Query 110720 AGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACGACCCGCCTGGT 110773 ||||||||| || | ||| | ||| | || || ||| || |||| |||| Sbjct 51742 CGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCC---TGGT 51686 Query 110774 TAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGAC 110833 |||||| || || ||| |||||||| | || ||||||||| | || | || | Sbjct 51685 CAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCC 51626 Query 110834 CATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATAC 110893 | || ||||| ||| || | |||||||||| ||| ||||| | |||||||| Sbjct 51625 CGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATAC 51566 Query 110894 CACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCG 110953 |||| || || ||| ||||| || | | || | || ||||| ||||| | Sbjct 51565 CACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGG 51506 Query 110954 AATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCAT 111013 |||| |||| | |||| ||| || || || ||||| ||||| || || || || | Sbjct 51505 AATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGT 51446 Query 111014 TGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGA 111073 |||| | || || | || ||| | || | |||||||| ||| || || || | Sbjct 51445 TGAATAAAGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTA 51386 Query 111074 GTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGA 111121 | |||| | | | |||||||||||| | ||| |||| ||||| Sbjct 51385 GAGCGGCCTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATGA 51338 >seq17 Length=290845 Score = 140 bits (154), Expect = 4e-28 Identities = 503/778 (65%), Gaps = 23/778 (3%) Strand=Plus/Minus Query 110373 ACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGT 110432 ||||||||| | ||| || | || ||| || || || || || | |||| |||| || Sbjct 196068 ACCCAAGTTTTGCTGGTTGGTCTTTCTGTTACAAGCGTCTTTGTAAACCATGAATGGCGT 196009 Query 110433 ACCAGTTTCCGTCTGTGACTTGAGA-ATGGCCTTCCATACATCGGCGGCGGGGACAGTTG 110491 ||| ||||| || |||| |||| | ||||| | ||| || | ||| || ||| Sbjct 196008 ACCGGTTTCTGTTTGTG-CTTGTAAGATGGCGTACCACACTTTTTGGGCCTTGATGGTT- 195951 Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551 ||| | ||||||| ||||| |||||| | || || ||||| | || | | Sbjct 195950 --TTACCACGACCTTCTCTTTCGTAACGGGTGTATAGCTCTTCGAATTCTTCACCCCAAA 195893 Query 110552 CATCAGAAAGACCCTTCGC----CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCC 110607 | || | ||| || |||| | | || |||| ||| ||| |||| Sbjct 195892 CGTCGTCCAAACCTGGGGCAGAACTTGGTG----AAAATAGGGTCCAGGCCCCATCCTCT 195837 Query 110608 TCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGA 110667 || || | ||||||||| || ||||||||||| | || | ||| | || | |||| Sbjct 195836 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGGGCAGGGAACAAATCTCTTGCACGA 195777 Query 110668 GCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCAT 110727 ||||| | ||| || | | | || | |||||| | ||| || | |||||| Sbjct 195776 ATTTCTTCCTTACCATGAGTTTTTCTGATATCAACAAAGTCGAAGATGTCTGCATGCCAT 195717 Query 110728 GGTTCGA-GATA--GACA---GCGATGGATCCCTTACGACGACCCGCCTGGTTAACATAG 110781 || || | || | | || || || || ||| || ||| |||| || || Sbjct 195716 GGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCT---TGGTCCACGTAA 195660 Query 110782 CGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTA 110841 ||||| ||| ||||||||| | || ||| ||||| | |||| || ||| || ||| Sbjct 195659 CGTGCAGTGTTATTGAAGACACGGATCATGGGAATCAACCCATTTGAAGTACCGTTGGTA 195600 Query 110842 CCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCC 110901 || ||| || ||| |||||| | || |||||| | ||||| |||||| || Sbjct 195599 CCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCA 195540 Query 110902 CACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCC 110961 ||| ||| ||||||||| | | || | |||||||| || || || || || Sbjct 195539 GTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGTCGTCC 195480 Query 110962 TTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGT 111021 || ||||||| || || ||||||||||| ||||| | ||||| || ||||| || || Sbjct 195479 TTCATGGCAATCAGGAAACAAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAAATAGA 195420 Query 111022 GTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAG 111081 || || | || ||| |||| | |||||| |||||| || | || |||| Sbjct 195419 GTGGGGGAAGCGTGAGTGAAGTATCTCAATGACATCAAGTTGTAAGTCTTCAGCACGGAC 195360 Query 111082 GGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTT 111138 | || ||||||| ||||| | ||| || ||||||| || || ||| || |||| Sbjct 195359 TCGATGTCGCTACCGTGGATACCCAGGGCCACACGCATGACCAGATGTTGGGGACGTT 195302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975631890000