Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 190 2e-43 seq17 185 1e-41 >seq5 Length=188055 Score = 190 bits (210), Expect = 2e-43 Identities = 879/1371 (64%), Gaps = 44/1371 (3%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 ||||| || || || || | ||| || || || | ||||| || || ||||| |||||| Sbjct 52694 GGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCC 52635 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCAG 106069 || ||||| ||| | || ||| | | | ||||| | || || | | |||||| Sbjct 52634 ATGGTCAAAGA--GTTTCTAACACCATGCTTCATGATGTCATTTCTCAA-AGTATCCCAA 52578 Query 106070 TCGTAGTTGAGCTT--GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACG 106127 || | | | | | ||||| | | ||||||| || |||||||| | ||||| || | Sbjct 52577 TCCCACAT-ACCGTAAGGTTTTTCGT-CCCACATGTCGAATTGAAGTATACCTTGAGAAG 52520 Query 106128 TGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCT 106187 ||||| || | || || || || | || | || ||| | ||||| || | Sbjct 52519 CTGGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTT 52460 Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA-TCTCCTTGGCTTCATCT 106246 ||| ||| || || ||||||||||||||||| | ||| | | | | ||||| || Sbjct 52459 CCATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTTAGTAAGCGT-GCTTCTTCG 52401 Query 106247 GAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 106306 || || |||| | || |||| || || || || | |||||| ||||||||| || Sbjct 52400 GAGTCGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCA 52341 Query 106307 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 106366 || || ||||||| ||||||||| ||| || ||| || |||||| | || | |||| Sbjct 52340 ATCGGCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCA 52281 Query 106367 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 106426 || || ||||| || || | || || | |||||||| || |||| | | | Sbjct 52280 ATAACGTTGTTTAAGTTACGAGTGATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTA 52221 Query 106427 AAAGTGCGAGT------CTCTTCA----TTGACATACTT--TGGAAGGGCGATTGATGCC 106474 | || ||| |||||| || ||| | ||| | || | || ||| Sbjct 52220 TATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCC 52161 Query 106475 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTG 106534 || || |||||||| |||||||| | | | ||| || | |||||| |||||||| Sbjct 52160 AAGTTACAAACAGCAGTCTCATCTGGAGCGGAGTATTCAACAATTTCACAGCACAAGTTA 52101 Query 106535 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAG 106594 || ||| || ||||| ||||||||||| || |||| || ||||||||||| Sbjct 52100 GACGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAA 52041 Query 106595 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC-ACATCGGC 106653 | | |||| || || || ||||| |||| | | || | | |||| | | | Sbjct 52040 ACAACAAAGGGTGTACCAGTTTCCGTTTGTGCTTCCAATATAGAGTACCACAATTTTTGG 51981 Query 106654 GGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 106713 | || | || | || | || || || ||||| || || ||||||||||| Sbjct 51980 GCCTTG----ATAGTCTTACCACGGCCTTCTTTTTCGTAACGGGTATATAGGGCTTCAAA 51925 Query 106714 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCC-TTGTCTGGACAGAAAAGAGACCATT 106772 || ||||| ||| | ||||| ||| ||| ||| |||| | || ||| Sbjct 51924 TTCGTCACCGTAGCAGTCACTTAAGCCTGGAGCCGATGT-AGGAGAGAATAAAGTCCAAG 51866 Query 106773 GACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGAT 106832 || || || || |||||||||||||| || |||| ||| || | || || | || Sbjct 51865 TGCCGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAAT 51806 Query 106833 CTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATA 106891 |||| ||| || ||||| | ||| || || || | || | ||| || | |||| Sbjct 51805 CTCTCGCACGGA-TTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATA 51747 Query 106892 TCCGCGTGCCATGGCTC--AAGATAG----ACTGCGATAGATCCCTTTCGACGCCCAGCT 106945 || |||||||||||||| || |||| | || || || ||| | ||| | Sbjct 51746 TCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTA---CCACCC 51690 Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005 || | ||||| || || ||| ||| || || || | ||| ||||| | || | || Sbjct 51689 TGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAA 51630 Query 107006 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 107065 || || || || ||| ||| | || | | | || || || | ||| Sbjct 51629 GTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCA 51570 Query 107066 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 107125 ||||| ||||| || || || ||||| ||| | | ||| | |||||||| | Sbjct 51569 ATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCA 51510 Query 107126 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 107185 || || || ||||| | || | ||||| || |||||| || || ||||||||||| Sbjct 51509 ATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCA 51450 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGT 107244 || ||||| | ||||| | |||||| | || || || |||||||| || || || Sbjct 51449 GCGTTGAATAAAGTTGGAGAGGCGTGAGT-AAAGTATTTTAGGGACATCAAGTTATAGGT 51391 Query 107245 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 || | | | ||||||| || ||||| || || | ||| || | ||| Sbjct 51390 TTCTAGAGCGGCCTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCAT 51340 >seq17 Length=290845 Score = 185 bits (204), Expect = 1e-41 Identities = 903/1407 (64%), Gaps = 50/1407 (4%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGA 105993 || ||||| | ||| ||||| || |||||||| | |||||||| |||| | || || Sbjct 196694 TACATGTTTGAAGTGACTGGTTCGAAACATTCATTGT-ACCCAAGAATTTGGGATGTAGA 196636 Query 105994 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGA---TG 106048 || ||||||||||| ||||| ||||| ||| | | |||| | | |||| || Sbjct 196635 AGCGGTTGGCATTGGGGCCATGGTTAAAGA--GTTTCTTA-ACCCATGT--TTGACAATG 196581 Query 106049 CGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATATCAA 106106 | ||| | | ||||| || | | | | ||| || | |||| |||| || | Sbjct 196580 TCCTTCTTTAAAGTGTCCCAATCCCACAT-ACCAAATGGCTTAGCATTCC-ACATGTCGA 196523 Query 106107 ATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTT 106166 |||| | | || | || | ||||| || ||||| || ||| ||||| || Sbjct 196522 ATTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAATATTTACCTTCCTTTT 196463 Query 106167 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 106226 ||| |||||||| || || |||| || || || || ||||| || || | || Sbjct 196462 GAGCTAATTCACAAGAAGCTTCAAGGGTGGCATGGTAAATAGTTTCGAAAATTTGCTTAT 196403 Query 106227 TCATCTCCTTG-GCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGC 106284 | | | ||| |||| || | ||||||| ||| ||| || ||| | ||| || Sbjct 196402 TAAG-TATTTGAGCTTTTTCACATTCAAATG-GTAAACGCAGCATCATATAGGTATCTGC 196345 Query 106285 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 106344 | ||||||||| |||| ||||||||||||||| ||||||||| |||| || ||| Sbjct 196344 CAAACCTTGAACCCCCAGGGCAATAGGTCTGTGTCTCATATTAGAGTTTCTAGCC-TCTG 196286 Query 106345 A-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403 || |||||| | || | ||| ||||||| || | || | || | | || | | Sbjct 196285 GCACTGGATAATAGTTACGGTCGATGACTCTATTCAAGTTATGAGTGATGACTTTAGCAA 196226 Query 106404 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT----TGA--------CAT 106451 | ||||| | ||| ||| | | ||| || | ||| ||| || Sbjct 196225 TATCATGTAAACTTTGGAAATTATAGGTGGCTGTTTTACCATCCTCTGAAGTCTCTACAA 196166 Query 106452 ACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACT 106511 | ||| ||||| || || || || || |||||||| || ||||| | |||| Sbjct 196165 ATGCTGGTAGGGCAATGGAAGCTAAGTTACAAACAGCTGTTTCATCTGGGGAAGAATACT 196106 Query 106512 CTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCT 106571 | | ||||| ||||| || || || || || ||||| || | ||||| ||| Sbjct 196105 CGACGATTTCGCAACACAGATTCGACGATTTGATAGTACCCAAGTTTTGCTGGTTGGTCT 196046 Query 106572 TTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGA 106631 || |||| || || || ||||| | |||| | ||||| || || || || |||| |||| Sbjct 196045 TTCTGTTACAAGCGTCTTTGTAAACCATGAATGGCGTACCGGTTTCTGTTTGTG-CTTGT 195987 Query 106632 GA-ATTGCCTTCCACACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTC 106689 | || || | |||||| | ||| | | |||| || | || || || || Sbjct 195986 AAGATGGCGTACCACACTTTTTGGGCCTTG----ATGGTTTTACCACGACCTTCTCTTTC 195931 Query 106690 GTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 106749 ||| ||||| || |||| || || |||||| ||||| | |||||| || Sbjct 195930 GTAACGGGTGTATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGA 195871 Query 106750 GTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGG 106809 ||| | || || | ||| ||| |||| || || |||||||||||||| || || Sbjct 195870 ACTTGGTGAAAATAGGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCAGG 195811 Query 106810 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 106869 |||||| |||| | || | |||||| ||| ||||| | ||| || | || Sbjct 195810 AATCCATAGGGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTTTTTCT 195751 Query 106870 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTC-AAGATAGACTGCGATAGATC 106928 | |||| || || | ||| || || ||||||||||| |||| | | || | | | Sbjct 195750 GATATCAACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAA-AGGGCAAAGGCAC 195692 Query 106929 C----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 106984 | || | | || | |||| | || || || || ||| || || || || | | Sbjct 195691 CGGGTCTCTTGTTACC-ACCTTGGTCCACGTAACGTGCAGTGTTATTGAAGACACGGATC 195633 Query 106985 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 107044 || ||||| | |||| ||| ||| || || || |||| ||| ||| | Sbjct 195632 ATGGGAATCAACCCATTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGA 195573 Query 107045 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 107104 | || | ||| || | |||| ||| || || ||| || || |||||||| | Sbjct 195572 ATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTC 195513 Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164 | ||| | || ||||| | ||| ||||| ||||| |||| || ||||| ||| ||| Sbjct 195512 AAAGTGTCGTAAATACCTTCGATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGAC 195453 Query 107165 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 107224 || || || ||| ||||| ||||| || || || || | |||||| |||| || || Sbjct 195452 ATTTGAGGGTGTGGCGTACCGGCATTAAATAGAGTGGGGGAAGCGTGAGTGAAG-TATCT 195394 Query 107225 TGG-GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 107283 |||||| || ||| |||| || || || || ||||| |||||||| || | Sbjct 195393 CAATGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATGTCGCTACCGTGGATACCCAG 195334 Query 107284 GGCCACACGCATAAACATGTATTGGGG 107310 |||||||||||| | || | |||||| Sbjct 195333 GGCCACACGCATGACCAGATGTTGGGG 195307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980431262000