Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq24 156 8e-33 >seq24 Length=351367 Score = 156 bits (172), Expect = 8e-33 Identities = 477/731 (65%), Gaps = 15/731 (2%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| ||||| || || |||||||| ||||| || |||| || ||||| ||| Sbjct 17657 TGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCCAAGGAAATGTTTTCC 17598 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCA 47957 ||||| |||||||||| || || | | ||| | || | ||| | Sbjct 17597 ATGAAATCGAAGGGGTTGTCGACCTTGTAGTACTTCTTGTTA--CCGAAGGCGACCAAGA 17540 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | || |||||| |||||| ||||| ||| | | | |||||| |||| | || Sbjct 17539 GTCTGTCTGCGACGAACTCGACGTATTGGTTCATCAAGTCGGCGTTCATACCTAGCAAGG 17480 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCT-CTATCTGCACGGCTTCCCCCACAATC 48076 || ||||| || | | || | || || | | |||| ||||| || || || Sbjct 17479 CGACTGGCAAGGCGTCTAGGAAGTA-TCTTTGTTCGATCTCGACGGCCTCGGTGACGATT 17421 Query 48077 TGCTTAACGCGGGACTCTGAG---GGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | || ||| || ||| | || ||||| || ||| ||| | | || ||| Sbjct 17420 TTCTCGACGATGG---CTGGGTCCGGCTTGTTTTTCAAGTG---GGCGAACAACAAACAG 17367 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| ||||||| |||||||| | || ||| || ||||||||||| | ||| Sbjct 17366 GCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAACCG 17307 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || || | || | |||||| || | ||||| || || |||||||||| Sbjct 17306 GGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAGACA 17247 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 || || | | ||||||||| || || || ||||| || | ||| |||| Sbjct 17246 CCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGGCGTCCTGGATC 17187 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || ||| ||||| || ||||||| ||| ||| || || || ||||| ||| Sbjct 17186 CATCTAAGGGCCCATTCGGCCTTCTCGCAGATTTCTGGGATGGTGTCGATGGCGTTGAAC 17127 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 | || || || | |||| | ||||| || || | | ||| | || Sbjct 17126 AAGAACTCGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAGGTTTCG 17067 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || |||||||||||||||||||| | ||||||| | ||| Sbjct 17066 GAGTGGATGTTCTCGATCGCGATCTGGAACCCGTAGAAACTCTTGGCCTCCGGGATCTGG 17007 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || |||||||| |||| | || || || ||||| || || || || || || ||| Sbjct 17006 ACCTCGGTGGAGAAGTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGCGGCGAAG 16947 Query 48554 AAGGCAAGGAC 48564 |||||||| || Sbjct 16946 AAGGCAAGCAC 16936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532217792000