Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq15 111 2e-19 >seq15 Length=305876 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139311 AGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTA 139370 || ||||| || ||||| ||||| |||||||| || | | || || || |||||| Sbjct 12675 AGGGCTTGAGCGGTGCAAATGTTTGAAGTTGCTTTATCACGCTTGATGTGTTGTTCTCTA 12616 Query 139371 GTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATT 139430 ||||||| |||| | |||| ||| ||| || |||| ||| ||| |||||| Sbjct 12615 GTTTGTAAAGCTAGACGCAGGGCAGTATTACCTAGGCGGTCCTTGGACACACCAACAATT 12556 Query 139431 CTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCT 139490 |||||||| || ||||| || ||| || | || || || |||||||||||||| Sbjct 12555 CTGCCAGGGATTTTTCTGTTCAGCTTATCAATAACGGCGAAAAAGGCAGCATGAGGACCA 12496 Query 139491 CCGTATCCCATAGGAATACCAAACCTTTG 139519 || || |||||||||| ||| || ||||| Sbjct 12495 CCATAACCCATAGGAACACCGAATCTTTG 12467 Score = 107 bits (118), Expect = 2e-18 Identities = 178/257 (69%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 139826 CTTCTTATCTCTTGTAGAATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTTC 139885 ||| || | ||| | || ||| ||| | ||||| || || | || ||||| |||| Sbjct 12139 CTTTTTCTTTCTGGAAGTATTGAATGACAGTAGCATAGCTTCACCAGCCGCAGTACCTTC 12080 Query 139886 ATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGTA 139945 ||| || | || |||||||| | || || || || || || | | | ||||| | Sbjct 12079 ATCCAACAATGAAGCGTTTGCCACAGGCAAACCAGTCAGATCGGAAACCACTGTTTGAAA 12020 Query 139946 ATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAAGATGT 140005 || | ||||||||||||||| ||||| ||||| |||| || || ||||||||||| || Sbjct 12019 GTTTAGTAAAGCTTCCAATCTACCCTGCGATATTTCAGGCTGGTAAGGAGTGTAAGAAGT 11960 Query 140006 GTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTTCCATA 140065 ||||| ||| | || | | ||||| || || ||||| ||| ||| || || || Sbjct 11959 ATACCATTCTGGACTTTCCAATAGGTTTCTTTGAATTACTGGCGGTAAAATCGTGCCGTA 11900 Query 140066 GTATCCTTGACCTATAA 140082 || || | ||| |||| Sbjct 11899 ATAACCCTTACCAATAA 11883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998038126000