Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 242 4e-59 >seq5 Length=188055 Score = 242 bits (268), Expect = 4e-59 Identities = 912/1405 (65%), Gaps = 44/1405 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| || | ||||| | ||||| | || || ||||| || ||||||| | | Sbjct 51325 CCACAACACTTAATCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCT 51384 Query 75272 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | || || || || |||||||| || || || | |||||| | ||||| | || Sbjct 51385 CTAGAAACCTATAACTTGATGTCCCTAAAATACTTT-ACTCACGCCTCTCCAACTTTATT 51443 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| ||||||||||||| || || |||||| || ||||| | || | ||||| || Sbjct 51444 CAACGCTGGTACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGA 51503 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || || | |||||||| | ||| | | ||| ||||| || || || ||||| Sbjct 51504 TTCCATTGAAGGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGG 51563 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| | || || || | | | || | ||| ||| || || || Sbjct 51564 TGGTATTGGTCTACATATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAA 51623 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || || | || | ||||| ||| | || || || ||| ||| || || ||||| Sbjct 51624 CGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGT 51683 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGCA 75624 | || ||| || |||| | || || | || | || ||||| |||||||| Sbjct 51684 TGACCA---GGGTGGTAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCA 51740 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || |||||| | || ||| | || | || || || ||| | ||||| || ||| Sbjct 51741 CGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAA-TCCGTG 51799 Query 75685 T-AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 |||||| | || || | || ||| |||| || |||||||||||||| || || || Sbjct 51800 CGAGAGATTTATTCCCAGCTCTATGGGTTCCCGATCTTTTCATGAAGCGTGTCGAAGAAA 51859 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAA-GGCACCAGGTCTCTCCGACGCGGTGGGT 75802 || ||| || | |||| ||| ||| ||| ||||| | ||| ||| Sbjct 51860 ACGGCACTTGGACTTTATTCTCTCCT-ACATCGGCTCCAGGCTTAAGTGACTGCTACGGT 51918 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 || || ||||||||||| || || || ||| | || || | | || |||| | Sbjct 51919 GACGAATTTGAAGCCCTATATACCCGTTACGAAAAAGAAGGCCGTGGTAA---GACTAT- 51974 Query 75863 CCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 | || | | | || ||| | |||| | || |||| ||||| ||||| ||||| | Sbjct 51975 CAAGGCCCAAAAATTGTGGTACTCTATATTGGAAGCACAAACGGAAACTGGTACACCCTT 52034 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 | | ||||||||||||||||||||| ||| ||||||||||| ||||| ||||| Sbjct 52035 TGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTATCAA 52094 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | || || | ||| |||||| | || ||| | | | |||||||| |||||||| Sbjct 52095 GTCGTCTAACTTGTGCTGTGAAATTGTTGAATACTCCGCTCCAGATGAGACTGCTGTTTG 52154 Query 76042 CAATTTGGCATCAATCGCCCTTCCA--AAGTATGTCAA----TGAAGAG------ACTCG 76089 || ||||| || | || | ||| | ||| || |||||| ||| Sbjct 52155 TAACTTGGCTTCTGTTGCTTTGCCAGCATTTATTGAAACATCTGAAGACGGCAAAACTTC 52214 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 || | | | | |||| || |||||||| | || || | || || ||||| Sbjct 52215 TACATATAACTTCAAAAAGCTACATGAAATTTCTAAAGTTATCACTCGTAACTTAAACAA 52274 Query 76150 AGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 || |||||| | || | |||||| || ||| || ||| ||||||||| ||||||| Sbjct 52275 CGTTATTGACCGTAACTATTATCCTGTCGAGGAAGCAAGAAGATCTAATATGAGACACAG 52334 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATT 76269 || |||| ||||||||| |||||| | || || || || |||| || | |||| Sbjct 52335 GCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACACTTTCATGTTGTTGCGTTTACCATT 52394 Query 76270 TGATTCAGATGAAGCCAAGGAGA-TGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 || || || ||||| | | | | ||| | ||||||||||||||||| || || | Sbjct 52395 CGACTCCGAAGAAGC-ACGCTTACTAAATATACAAATCTTTGAAACCATGTACCATGCTT 52453 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 || |||| || |||||| | ||| || | || | || || || || | || | Sbjct 52454 CCATGGAAGCCTCTTGTGAGCTAGCTCAAAGAGATGGCCCATACGAAACCTTCCAAGGCT 52513 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACC--AAGCTCAA 76446 |||| || || ||||| | ||||| || || ||||||| | | ||||| | | | | Sbjct 52514 CTCCAGCTTCTCAAGGTATACTTCAATTCGACATGTGGG-ACGAAAAACCTTACGGT-AT 52571 Query 76447 CTACGACTGGGATGTTCTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 | || |||||| | | || || | ||||| | || | ||| || | ||| ||||| Sbjct 52572 GTGGGATTGGGATACT-TTGAGAAATGACATCATGAAGCATGGTGTTAGAAAC--TCTTT 52628 Query 76506 --TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 76563 |||||||| ||||| || || ||||| | || || || ||| | || || || || Sbjct 52629 GACCATGGCACCTATGCCTACTGCATCCACTTCCCAGATTTTAGGTTACAACGAGTGTTT 52688 Query 76564 TGAACCATACACAACAAACATCTAC 76588 |||||| || | ||||| ||| Sbjct 52689 CGAACCAGTTACTTCCAACATGTAC 52713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569227144000