Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq40 116 5e-21 seq16 114 2e-20 seq14 114 2e-20 >seq40 Length=705427 Score = 116 bits (128), Expect = 5e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895 |||| || |||||||| || || || || ||||||| ||| |||||| | ||| | Sbjct 667911 TTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATTGACA 667852 Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955 | || ||| || || ||||| |||||||| || || || || |||||||||||||| | Sbjct 667851 ATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCT 667792 Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA-GAG 156014 ||| |||||||| | ||||| ||||| || || || || || || || ||| || Sbjct 667791 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACAT-TCAAAAGGAA 667733 Query 156015 GCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | || | |||||||| || ||||| ||||| ||| Sbjct 667732 TCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGT 667697 >seq16 Length=189800 Score = 114 bits (126), Expect = 2e-20 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891 ||| | ||||| |||||||| || || || || || ||||| ||| |||||| | |||| Sbjct 50626 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 50685 Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951 || || || || || ||||| || ||||| || ||||| || ||||||||||| Sbjct 50686 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 50745 Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011 || | ||| |||||||| | ||||| ||||| || || || || | | ||||||| Sbjct 50746 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACA--ACATCCAAA 50803 Query 156012 --GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || | || | |||||||| || ||||| ||||| ||| Sbjct 50804 AGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGT 50844 >seq14 Length=538356 Score = 114 bits (126), Expect = 2e-20 Identities = 167/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| || | || || || || || || |||||||| | ||||| ||| | Sbjct 529691 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 529632 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | ||| || || || ||| || ||||| || ||||| || || || || Sbjct 529631 TCAGACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 529572 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||| | ||| |||||||| | ||||| ||||||||| || || || Sbjct 529571 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 529512 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | | ||||||| ||| | || | || || || || ||||| ||||| |||| Sbjct 529511 A--ACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGGTG 529460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871542580000