Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq24 95.1 2e-13 >seq24 Length=351367 Score = 95.1 bits (104), Expect = 2e-13 Identities = 220/331 (66%), Gaps = 17/331 (5%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||||||||| | | ||||| ||||||| ||| | |||||||| | || | || Sbjct 17349 ACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAACCGGGCATCATACCTCTTTT 17290 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| | ||| ||||||| ||| || ||||| |||| || |||| || ||| || Sbjct 17289 CTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAGACACCTTCGATGGAGGCGAA 17230 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTT---GATCCACTTCATCGC 794516 |||| || | || | || |||| | || || |||||| | | || Sbjct 17229 CGCGACCAGTCTTTCACCGAA------CAGGGCATCGGCGTCCTGGATCCATCTAAGGGC 17176 Query 794517 CCACTCTGCCTTTTTCCTCACCGAG----GGCACCGTGTCGATGGCGCGAAAGAGGTGGT 794572 ||| || ||||| ||| | || || | |||||||||||| || | | | Sbjct 17175 CCATTCGGCCTT----CTCGCAGATTTCTGGGATGGTGTCGATGGCGTTGAACAAGAACT 17120 Query 794573 CCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGA 794632 | | || |||||||||| |||||||||||| | | |||||||| || ||||||| Sbjct 17119 CGCTTTCCTTGGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAGGTTTCGGAGTGGA 17060 Query 794633 TGTTTTCGATGGCGATCTGGAAGCCATAAAA 794663 |||| ||||| ||||||||||| || || || Sbjct 17059 TGTTCTCGATCGCGATCTGGAACCCGTAGAA 17029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916241081271950