Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq19 141 7e-29
seq40 136 3e-27
seq14 116 3e-21
>seq19
Length=415998
Score = 141 bits (156), Expect = 7e-29
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
||| ||||| ||||| || ||||| |||||||||||||| || | | || | | |||
Sbjct 67546 CAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTATAGTCTGACAGCGTTCTACCATC 67605
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| |||||||| || ||| | |||||||| || || || || |||||||| || |||||
Sbjct 67606 TTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTC 67665
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | || || ||| | |||| ||||||||| ||| || || | ||| |||||
Sbjct 67666 CTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAGT 67725
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| ||||| ||||| || |||||
Sbjct 67726 CTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 67758
Score = 134 bits (148), Expect = 1e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|| ||||| ||||| || ||||| ||||||||||| ||||||| | || | | |||
Sbjct 68003 AGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCATCT 68062
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| | ||||| || ||| | |||||||| || || || || |||||||| || |||||
Sbjct 68063 TCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCC 68122
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | || || ||| | |||| ||||||||| ||| || || | ||| |||||
Sbjct 68123 TGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAAGTGATAGTC 68182
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||||| ||||| ||||| ||||||||
Sbjct 68183 TTACCAGTTAGAGTTTTGACAAAAATCTGCAT 68214
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|| ||||| ||||| ||||| |||||||||||||| ||||||| | || | | ||
Sbjct 67775 AGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGATAGCGTTCTACCGTCT 67834
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| |||||||| ||||| | ||||| || || || ||||| |||||||| || |||||
Sbjct 67835 TCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCC 67894
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | || ||||| | || | ||||||||| ||| || || | ||||| ||
Sbjct 67895 TGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTC 67954
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || | ||||| ||||| ||||||||
Sbjct 67955 TTACCGGTCAGAGTTTTGACAAAAATCTGCAT 67986
Score = 122 bits (134), Expect = 7e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|| ||||| ||||| |||||||| ||||||||||| ||||||| | || | | ||
Sbjct 68231 AGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTTCTACCGTCT 68290
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| |||||||| ||||| | ||||| || || || ||||| ||||| || || |||||
Sbjct 68291 TCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCTTCCTTGTCC 68350
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | ||| ||||| | || | ||| |||||| ||| || || | ||| |||||
Sbjct 68351 TGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAAGTAATAGTC 68410
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| | || || || || || |||||
Sbjct 68411 TTACCAGTCAGTGTCTTGACGAAAATTTGCAT 68442
>seq40
Length=705427
Score = 136 bits (150), Expect = 3e-27
Identities = 163/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || || ||||| | |||||||| ||||||||||| || || |
Sbjct 667698 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 667757
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 667758 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 667817
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| ||||||||||| ||| || | ||||||| | || | ||||||||| ||| ||
Sbjct 667818 ATACCTTCTTTGTCTTG-AATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAAC 667876
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
||| ||||| || || || ||||| || || ||||| ||
Sbjct 667877 TTCTAGAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 667915
>seq14
Length=538356
Score = 116 bits (128), Expect = 3e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | ||||| || ||||| ||||| || || |
Sbjct 529462 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 529521
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | || || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 529522 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 529581
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| || | |||||| | || | ||||| ||| ||| ||
Sbjct 529582 ATACCTTCCTTGTCTTG-AATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAAC 529640
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|||||| || ||||| || || ||||| || || || || || ||||| ||
Sbjct 529641 TTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 529691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218965257050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |