Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq5 152 1e-31
seq50 123 6e-23
seq17 107 5e-18
seq39 91.5 3e-13
>seq5
Length=188055
Score = 152 bits (168), Expect = 1e-31
Identities = 560/864 (65%), Gaps = 16/864 (2%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|| || ||||| |||||| | |||||| | || ||| | | ||||| || | | |
Sbjct 51259 TACTTCGGTTTTAAAACTTTAGAACGTTCGTACTTATTGAGAGTCAACGGTCAAGTTGCT 51318
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|||||||| |||||| | | | | || || | |||||||| || || | ||| |
Sbjct 51319 GAACGTCCACAACACTTAATCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAG 51378
Query 110424 GCTGTTATTGAATGTTATGATGT-AT-TAAGTAAAAAGAAAGCTATTCATGCTACTCCTA 110481
|| | | | ||| ||| | | || | ||||| | || ||| || |||| |
Sbjct 51379 GCCGCTCTAGAAACCTATAACTTGATGTCCCTAAAAT--ACTTTACTCACGCCTCTCCAA 51436
Query 110482 CCCTATTTAACGCAGGAACTAATGGAGGA-CAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540
| |||| ||||| || || | || ||| || | || || || || | | |||
Sbjct 51437 CTTTATTCAACGCTGGTAC-ACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATG 51495
Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600
|| |||||||| ||||||||||| || || || | || ||| |||| | ||||| |||
Sbjct 51496 AAGGATGATTCCATTGAAGGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAA 51555
Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660
| |||| || |||||| | || |||| | ||||| ||| || | | || ||
Sbjct 51556 ACTGCTGGTGGTATTGGTCTACATATTCACAACATTCGTGCAACCGGCTCTTACATTGCT 51615
Query 110661 ACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCA 110720
|||| || |||| | || | |||| ||| | | ||||||||| |||||||
Sbjct 51616 GGTACGAACGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCC 51675
Query 110721 AAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCT 110777
||||| | || |||||| |||||| ||| | |||||| | ||| | || ||
Sbjct 51676 CGTTATGTTGACCAGGGTGGTAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCA 51735
Query 110778 TGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAA 110837
||||| | ||||| || || ||| | || || | || ||||| || ||||||
Sbjct 51736 TGGCACGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATC 51795
Query 110838 AGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAA 110897
| || | |||||||| || | ||| || | ||| | |||||||| ||||| ||
Sbjct 51796 CGTGCGAGAGATTTATTCCCAGCTCTATGGGTTCCCGATCTTTTCATGAAGCGTGTCGAA 51855
Query 110898 GAAAATGGCATGTGGTCTCTTATGTGTCCT-CATCGTTCTCCTGGTCTATCTGATGTATA 110956
||||| |||| ||| || | | | |||| ||||| |||| || || ||| ||
Sbjct 51856 GAAAACGGCACTTGGACTTTATTCTCTCCTACATCG-GCTCCAGGCTTAAGTGACTGCTA 51914
Query 110957 TGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACA 111016
|| | || ||||||| ||| || || |||||||||||| || | || |
Sbjct 51915 CGGTGACGAATTTGAAGCCCTATATACCCGTTACGAAAAAGAAGGC-CGT---GGTAAGA 51970
Query 111017 AATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTC 111075
|| | || ||| || | |||| | || | ||| ||||| |||||||| || |
Sbjct 51971 CTATCAAGGCCCAAAAATTGTGGTACTCTATATTGGAAGCACAAACGGAAACTGGTACAC 52030
Query 111076 CTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAA 111135
| | | || | || || ||| | ||| | ||||| || |||| ||| || || |
Sbjct 52031 CCTTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTA 52090
Query 111136 TTAAGTCTAGTAATTTGTGCTGTG 111159
| ||||| ||| ||||||||||
Sbjct 52091 TCAAGTCGTCTAACTTGTGCTGTG 52114
Score = 95.1 bits (104), Expect = 3e-14
Identities = 148/205 (72%), Gaps = 14/205 (7%)
Strand=Plus/Plus
Query 113242 TGAAAGATGTATTTAAGACTATTTGGGAAATTAAGCAACGTGTCGTAATTGATATGGCTG 113301
|||||||| | | ||||||| ||||||||||| ||| | ||| | ||||| |
Sbjct 52865 TGAAAGATTTGTATAAGACTGTTTGGGAAATTTCACAAAAGACTATCATTAACATGGCAG 52924
Query 113302 CAGATCGTGGCAAGTTTA--TCGATCAATCTCAGTCGATGAACTTATTTATGCCGGACAC 113359
| || |||| | ||||| |||||||||| || || |||| ||||| ||| | | |
Sbjct 52925 CCGACCGTGCC--GTTTACATCGATCAATCCCATTCTTTGAATTTATTCTTGCGTGCCCC 52982
Query 113360 CTCACCA--GATAAGGTGACA--TCTGCTCTATTT-TACGGCTGGAAAAAAGGTTTAAAA 113414
|||| | |||| | ||| | ||| |||| ||||| ||||| |||||| ||||
Sbjct 52983 A--ACCATGGGTAAGCTAACAAGTATGC---ATTTCTACGGTTGGAAGAAAGGTCTAAAG 53037
Query 113415 ACAGGTATGTATTATTTGCGAACAC 113439
|| ||||||||||||||| ||||||
Sbjct 53038 ACCGGTATGTATTATTTGAGAACAC 53062
>seq50
Length=415935
Score = 123 bits (136), Expect = 6e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377
|| |||||| ||||| ||||| | ||||| || || |||||||||||||||||||||
Sbjct 187675 GATAATGATCCAGTTCTATTCAACCGTCAACCTTCGCTTCATAAAATGTCTATGATGGCT 187616
Query 305378 CATAAAGTCAAAGTATTATCTGGATT-GACATTTCGATTAAATGTAAGTGCTTGTACGCC 305436
|||| ||| ||||| | || ||| ||||| |||| ||| | || | | ||
Sbjct 187615 CATAGAGTGAAAGT-TATTCCATATTCTACATTCAGATTGAATTTGTCTGTCACTTCTCC 187557
Query 305437 TTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTAC 305496
||||| || ||||||||||| |||||||||||| | ||||| |||||||| ||| ||
Sbjct 187556 ATATAACGCCGATTTTGATGGTGATGAAATGAATCTTCATGTTCCTCAATCTGAGGAGAC 187497
Query 305497 AATGACTGAATTATCAGAAATATGTTCTGT 305526
|| | ||| |||| | ||||| ||||
Sbjct 187496 AAGAGCGGAACTATCCCAGTTATGTGCTGT 187467
>seq17
Length=290845
Score = 107 bits (118), Expect = 5e-18
Identities = 263/398 (66%), Gaps = 3/398 (1%)
Strand=Plus/Plus
Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570
||| || ||||||| || || | | || || || || || || ||||||||||| ||
Sbjct 195448 CAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATCGAAGGTATTTACGAC 195507
Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCAT 110630
|| | ||||| ||| | ||||| || | | || || ||||| |||| | |
Sbjct 195508 ACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGTCTTCATATCAAC 195567
Query 110631 GATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTT 110690
||||||| || | ||| | |||| ||| | || ||| |||||| ||| | ||
Sbjct 195568 AATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCAAATGGGTTGATT 195627
Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGA 110747
|| ||| | | |||||||| |||||||| || ||| | ||||||||| ||||||
Sbjct 195628 CCCATGATCCGTGTCTTCAATAACACTGCACGTTACGTGGACCAAGGTGGTAACAAGAGA 195687
Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807
|| | ||||| | | | || || |||||| |||| || || || || | ||
Sbjct 195688 CCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATCTTCGACTTTGTTGAT 195747
Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867
| | |||| ||| || |||||| | ||| | ||||| || ||| | |||
Sbjct 195748 ATCAGAAAAACTCATGGTAAGGAAGAAATTCGTGCAAGAGATTTGTTCCCTGCCCTATGG 195807
Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGG 110905
||| | ||| | |||||||| ||||| |||| ||||
Sbjct 195808 ATTCCTGATCTTTTCATGAAGCGTGTCGAAGAGGATGG 195845
>seq39
Length=861967
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 167616 GCAGCAATAGACATAGTGTCAAAAACATCGATGAAACTTTTCCAGATTTTTATCGAACCA 167675
||||| | || || ||||| || |||||||| ||||||||||| | || || |
Sbjct 682123 GCAGCTAGAGGCAGAGTGTTGAAGGTGTCGATGAACGTTTTCCAGATTCTGATATTACAA 682064
Query 167676 CGTCGTTTGCATTCATCGTAAAAACCATAGTCTCTTGAGATATCAGCACATTCGTGATTT 167735
|||||||| |||||||| ||||| ||||| |||||| | || ||||||||||| ||
Sbjct 682063 CGTCGTTTACATTCATCATAAAATCCATAAACTCTTGTTACATTGGCACATTCGTGGTTA 682004
Query 167736 CCTCTTAA 167743
||||| ||
Sbjct 682003 CCTCTCAA 681996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812039698050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |