Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq40 89.7 5e-13 seq24 89.7 5e-13 seq19 89.7 5e-13 seq16 89.7 5e-13 >seq40 Length=705427 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243 || || || || || || || || | ||||| | ||||| ||| | || || || Sbjct 667915 TTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 667856 Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303 || | || ||| || ||| || ||||| ||||| || || || || |||||| | Sbjct 667855 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 667796 Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361 || | | || || ||| | ||||| | ||||| |||| ||| ||||| ||||||| Sbjct 667795 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTC--CGACTACAACATTCAAA 667738 Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | |||||||| | |||||||| || ||||||||||| || Sbjct 667737 AGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 667698 >seq24 Length=351367 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 110710 GTGCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACG-T 110768 || ||||| | || | ||| ||||| |||||| ||| ||||| ||||| || || | Sbjct 16992 GTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGCGGCGAAGAAGGCAAGCACTCT 16933 Query 110769 GTTTAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGG 110828 | | ||| ||||| ||| || ||||||| | | ||||||||||| | | |||||||| Sbjct 16932 GGAGATGAA-GAATCTTTCGTTTTCGTTCATTCTGTTGTTCCAGTCGTGGATGTCCTTGG 16874 Query 110829 ACATGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAA 110888 ||| |||||| || ||| | ||||| | | | || |||||||||||||| | Sbjct 16873 ACAAGTCGATTTCCTCGGCAGTCCAGAAGGAGGCCTCGGCACGCTTGTACGATTGCC--A 16816 Query 110889 GATCT 110893 ||||| Sbjct 16815 GATCT 16811 >seq19 Length=415998 Score = 89.7 bits (98), Expect = 5e-13 Identities = 165/240 (69%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 25164 AATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAG 25223 ||||| ||| |||||| | || || || ||| | || || || | || || | || | Sbjct 68453 AATTAGACACTATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGG 68394 Query 25224 TCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATAC 25283 ||||| | ||||||||||| | || || ||||| || || || || || | Sbjct 68393 TCGAATCTTCTGATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTC 68334 Query 25284 CGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGT 25341 | || || || || || | |||| || || |||||||| ||||| | ||||| ||| Sbjct 68333 CTCCGGACCAACAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGT 68274 Query 25342 CAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | |||||||| |||||||| |||||||| |||| || || |||| | ||||| || Sbjct 68273 C--GGATTACAACATTCAAAAGGAATCCACTCTTCACTTGGTCCTAAGGCTAAGAGGTGG 68216 >seq16 Length=189800 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243 ||||| ||||| || || || || | ||||| | ||||| ||| | || ||||| Sbjct 50626 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 50685 Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303 || | || || ||| ||| || || || ||||| || || || || |||||| | Sbjct 50686 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 50745 Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAA 25361 || | | || || ||| | ||||| | ||||| |||| | | ||||| || |||| Sbjct 50746 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTG--ACTACAACATCCAAA 50803 Query 25362 AAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | |||||||| | |||||||| || ||||||||||| || Sbjct 50804 AGGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 50843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094121816000