Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq24 136 6e-26
seq17 86.0 9e-11
>seq24
Length=351367
Score = 136 bits (150), Expect = 6e-26
Identities = 386/581 (66%), Gaps = 29/581 (5%)
Strand=Plus/Plus
Query 1455749 GTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTC 1455808
||| |||||||||||| ||||| ||| ||| || |||| || |||||||||||
Sbjct 16786 GTCTTGTTCCCCATCCAGTACCACGAGATCTGGCAATCGTAC-AAGCGTGCCGAGGCCTC 16844
Query 1455809 CTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGC---- 1455864
||| ||||| |||||||| ||||| | | |||| ||||| | || |
Sbjct 16845 CTTCTGGACTGCCGAGGAAATCGACTTGTCCAAGGACA---TCCAC-GACTGGAACAACA 16900
Query 1455865 ---TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGC 1455921
||| ||| |||| | |||||| || || ||||| || ||||||| |
Sbjct 16901 GAATGAACGAAAACGAAAGATTCTTCATCTCCAGAGTGCTTGCCTTCTT-CGCCGCCTCC 16959
Query 1455922 GATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAG 1455981
|| || ||||| ||| ||| ||| || ||| | |||||||| | || |||
Sbjct 16960 GACGGTATCGTCAACGAAAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAG 17019
Query 1455982 GCACGTTTGTTT-TACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTC 1456040
|| | |||| ||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct 17020 GC-CAAGAGTTTCTACGGGTTCCAGATCGCGATCGAGAACATCCACTCCGAAACCTACTC 17078
Query 1456041 GCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCAT 1456100
| |||||||||||||| |||||||||| || | || | | || ||||||
Sbjct 17079 CTTGTTGATCGACACCTACATCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCAT 17138
Query 1456101 CGACACGGTGCC----GTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACA 1456156
|||||| | || || | ||| |||||||| ||||| | | ||||| |
Sbjct 17139 CGACACCATCCCAGAAATCTGCGAG----AAGGCCGAATGGGCCCTTAGATGGAT---CC 17191
Query 1456157 AGGAGGGC-CTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCT 1456214
|||| | | | | || | || | || |||| || ||| | |||| || |||
Sbjct 17192 AGGACGCCGATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCT 17251
Query 1456215 TTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTC 1456274
| ||||| || ||| | ||||||| ||| | ||||| | || | |||||||||
Sbjct 17252 TCTTCTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGT- 17310
Query 1456275 TTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAGTTTT 1456315
|| ||| ||||||| | ||| | | ||||||| |||
Sbjct 17311 TTGACCTTCTCCAACGAACTGATCTGCAGAGACGAAGGTTT 17351
>seq17
Length=290845
Score = 86.0 bits (94), Expect = 9e-11
Identities = 173/257 (67%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
||||| || ||||||||||| ||||| | ||| || | || || || || ||| | | |
Sbjct 195415 CCCACTCTATTTAATGCCGGTACGCCACACCCTCAAATGTCTTCTTGTTTCCTGATTGCC 195474
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| || ||||| || || || ||||| | || |||| || | || |||
Sbjct 195475 ATGAAGGACGACTCCATCGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCC 195534
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| | || || || | ||| || |||| | || || | ||| | || |
Sbjct 195535 AAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATATT 195594
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
|| || |||||||| || || || | | |||||| | || || || || ||||
Sbjct 195595 GCAGGTACCAACGGTACTTCAAATGGGTTGATTCCCATGATCCGTGTCTTCAATAACACT 195654
Query 260165 GCGCGCTACGTCGACCA 260181
|| || ||||| |||||
Sbjct 195655 GCACGTTACGTGGACCA 195671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177806377408100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |