Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq24 136 6e-26 seq17 86.0 9e-11 >seq24 Length=351367 Score = 136 bits (150), Expect = 6e-26 Identities = 386/581 (66%), Gaps = 29/581 (5%) Strand=Plus/Plus Query 1455749 GTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTC 1455808 ||| |||||||||||| ||||| ||| ||| || |||| || ||||||||||| Sbjct 16786 GTCTTGTTCCCCATCCAGTACCACGAGATCTGGCAATCGTAC-AAGCGTGCCGAGGCCTC 16844 Query 1455809 CTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGC---- 1455864 ||| ||||| |||||||| ||||| | | |||| ||||| | || | Sbjct 16845 CTTCTGGACTGCCGAGGAAATCGACTTGTCCAAGGACA---TCCAC-GACTGGAACAACA 16900 Query 1455865 ---TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGC 1455921 ||| ||| |||| | |||||| || || ||||| || ||||||| | Sbjct 16901 GAATGAACGAAAACGAAAGATTCTTCATCTCCAGAGTGCTTGCCTTCTT-CGCCGCCTCC 16959 Query 1455922 GATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAG 1455981 || || ||||| ||| ||| ||| || ||| | |||||||| | || ||| Sbjct 16960 GACGGTATCGTCAACGAAAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAG 17019 Query 1455982 GCACGTTTGTTT-TACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTC 1456040 || | |||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct 17020 GC-CAAGAGTTTCTACGGGTTCCAGATCGCGATCGAGAACATCCACTCCGAAACCTACTC 17078 Query 1456041 GCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCAT 1456100 | |||||||||||||| |||||||||| || | || | | || |||||| Sbjct 17079 CTTGTTGATCGACACCTACATCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCAT 17138 Query 1456101 CGACACGGTGCC----GTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACA 1456156 |||||| | || || | ||| |||||||| ||||| | | ||||| | Sbjct 17139 CGACACCATCCCAGAAATCTGCGAG----AAGGCCGAATGGGCCCTTAGATGGAT---CC 17191 Query 1456157 AGGAGGGC-CTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCT 1456214 |||| | | | | || | || | || |||| || ||| | |||| || ||| Sbjct 17192 AGGACGCCGATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCT 17251 Query 1456215 TTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTC 1456274 | ||||| || ||| | ||||||| ||| | ||||| | || | ||||||||| Sbjct 17252 TCTTCTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGT- 17310 Query 1456275 TTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAGTTTT 1456315 || ||| ||||||| | ||| | | ||||||| ||| Sbjct 17311 TTGACCTTCTCCAACGAACTGATCTGCAGAGACGAAGGTTT 17351 >seq17 Length=290845 Score = 86.0 bits (94), Expect = 9e-11 Identities = 173/257 (67%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 ||||| || ||||||||||| ||||| | ||| || | || || || || ||| | | | Sbjct 195415 CCCACTCTATTTAATGCCGGTACGCCACACCCTCAAATGTCTTCTTGTTTCCTGATTGCC 195474 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || ||||| || || || ||||| | || |||| || | || ||| Sbjct 195475 ATGAAGGACGACTCCATCGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCC 195534 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| | || || || | ||| || |||| | || || | ||| | || | Sbjct 195535 AAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATATT 195594 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || || |||||||| || || || | | |||||| | || || || || |||| Sbjct 195595 GCAGGTACCAACGGTACTTCAAATGGGTTGATTCCCATGATCCGTGTCTTCAATAACACT 195654 Query 260165 GCGCGCTACGTCGACCA 260181 || || ||||| ||||| Sbjct 195655 GCACGTTACGTGGACCA 195671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177806377408100