Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq3 143 2e-29
>seq3
Length=553868
Score = 143 bits (158), Expect = 2e-29
Identities = 375/567 (66%), Gaps = 10/567 (2%)
Strand=Plus/Minus
Query 19357 CTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTT 19416
|| || || || || ||| ||| ||||| |||||||| || || | ||| | | ||
Sbjct 139056 CTCTACGGTCCTCCAGGTACTGGTAAAACGTTAATTGCAAGGAAAATCGGTACAATGCTG 138997
Query 19417 ACAAAACAACCTCCCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCA 19475
| | ||| ||||| || || || ||||||||| || ||| ||||||||| |||
Sbjct 138996 A-ACGCCAAAGAGCCAAAGATCGTTAACGGTCCTGAAGTCCTAAGTAAATATGTTGGTTC 138938
Query 19476 ATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGG 19535
|| |||||||| | || ||| || ||||| |||| ||| | || | |||
Sbjct 138937 CTCAGAAGAAAACATCCGTAATTTATTCAAAGACGCAGAAGCGGAATACAAG-GCCAAGG 138879
Query 19536 GCGCAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAA 19594
| | || ||| || || || || ||| | |||||| | || | | | ||||| |
Sbjct 138878 GTGATGAATCTTCCTTACATATCATCATATTTGATGAACTAGATTCTGTTTTCAAGCAGA 138819
Query 19595 GAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAA 19648
||||||| || || | ||| ||| |||| ||| || |||||||| ||| | |
Sbjct 138818 GAGGTTCAAGAGGTGATGGTACTGGTGTAGGCGACAATGTAGTTAATCAACTACTGGCTA 138759
Query 19649 AATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGG 19708
|| | || |||||| | ||||||||||||||||| || || || ||||| ||| | |
Sbjct 138758 AAATGGATGGTGTTGATCAACTGAATAATATTTTGGTCATCGGTATGACCAATCGTAAAG 138699
Query 19709 AATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACT 19768
| || || || | || | ||||| || ||| | || ||| | || | |||||| | |
Sbjct 138698 ATTTGATCGATATTGCTCTTTTACGTCCAGGTAGATTCGAAGTTCAGGTTGAAATTCATT 138639
Query 19769 TACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAA 19828
|||| || ||| || | || | ||||| |||| || || | ||| || |||
Sbjct 138638 TACCGGACGAAAAAGGTAGACTGCAGATTTTTGACATTCAAACGAAGAAAATGAGAGAAA 138579
Query 19829 ATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATA 19888
|||| | | | |||||||| | ||| ||| | ||||| || || || | |
Sbjct 138578 ATAATATGATGAGCGACGATGTTAACTTAGCTGAACTAGCAGCTTTAACTAACAATTTTT 138519
Query 19889 GCGGCGCAGAACTTGAGGGATTAGTGA 19915
||| || ||| |||| || |||||||
Sbjct 138518 CCGGTGCTGAAATTGAAGGTTTAGTGA 138492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455757800250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |