Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3 143 2e-29 >seq3 Length=553868 Score = 143 bits (158), Expect = 2e-29 Identities = 375/567 (66%), Gaps = 10/567 (2%) Strand=Plus/Minus Query 19357 CTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTT 19416 || || || || || ||| ||| ||||| |||||||| || || | ||| | | || Sbjct 139056 CTCTACGGTCCTCCAGGTACTGGTAAAACGTTAATTGCAAGGAAAATCGGTACAATGCTG 138997 Query 19417 ACAAAACAACCTCCCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCA 19475 | | ||| ||||| || || || ||||||||| || ||| ||||||||| ||| Sbjct 138996 A-ACGCCAAAGAGCCAAAGATCGTTAACGGTCCTGAAGTCCTAAGTAAATATGTTGGTTC 138938 Query 19476 ATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGG 19535 || |||||||| | || ||| || ||||| |||| ||| | || | ||| Sbjct 138937 CTCAGAAGAAAACATCCGTAATTTATTCAAAGACGCAGAAGCGGAATACAAG-GCCAAGG 138879 Query 19536 GCGCAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAA 19594 | | || ||| || || || || ||| | |||||| | || | | | ||||| | Sbjct 138878 GTGATGAATCTTCCTTACATATCATCATATTTGATGAACTAGATTCTGTTTTCAAGCAGA 138819 Query 19595 GAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAA 19648 ||||||| || || | ||| ||| |||| ||| || |||||||| ||| | | Sbjct 138818 GAGGTTCAAGAGGTGATGGTACTGGTGTAGGCGACAATGTAGTTAATCAACTACTGGCTA 138759 Query 19649 AATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGG 19708 || | || |||||| | ||||||||||||||||| || || || ||||| ||| | | Sbjct 138758 AAATGGATGGTGTTGATCAACTGAATAATATTTTGGTCATCGGTATGACCAATCGTAAAG 138699 Query 19709 AATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACT 19768 | || || || | || | ||||| || ||| | || ||| | || | |||||| | | Sbjct 138698 ATTTGATCGATATTGCTCTTTTACGTCCAGGTAGATTCGAAGTTCAGGTTGAAATTCATT 138639 Query 19769 TACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAA 19828 |||| || ||| || | || | ||||| |||| || || | ||| || ||| Sbjct 138638 TACCGGACGAAAAAGGTAGACTGCAGATTTTTGACATTCAAACGAAGAAAATGAGAGAAA 138579 Query 19829 ATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATA 19888 |||| | | | |||||||| | ||| ||| | ||||| || || || | | Sbjct 138578 ATAATATGATGAGCGACGATGTTAACTTAGCTGAACTAGCAGCTTTAACTAACAATTTTT 138519 Query 19889 GCGGCGCAGAACTTGAGGGATTAGTGA 19915 ||| || ||| |||| || ||||||| Sbjct 138518 CCGGTGCTGAAATTGAAGGTTTAGTGA 138492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455757800250