Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq5 230 3e-55
>seq5
Length=188055
Score = 230 bits (254), Expect = 3e-55
Identities = 908/1405 (65%), Gaps = 44/1405 (3%)
Strand=Plus/Minus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766
||| ||||| | || |||||| || || || || | ||| || || || | |||||
Sbjct 52713 GTACATGTTGGAAGTAACTGGTTCGAAACACTCGTTGTAACCTAAAATCTGGGAAGTGGA 52654
Query 110767 GGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATG-CG 110823
|| || ||||| |||||||| ||||| ||| | || ||| | || | ||||| |
Sbjct 52653 TGCAGTAGGCATAGGTGCCATGGTCAAAGA--GTTTCTAACACCATGCTTCATGATGTCA 52596
Query 110824 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATGTCAAAC 110881
|| || | | |||||| || | | | | | ||||| | | |||||||||| ||
Sbjct 52595 TTTCTCAA-AGTATCCCAATCCCACAT-ACCGTAAGGTTTTTCGT-CCCACATGTCGAAT 52539
Query 110882 TGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA 110941
||||| | ||||| || || ||||| || | |||||||| || | || | || |
Sbjct 52538 TGAAGTATACCTTGAGAAGCTGGAGAGCCTTGGAAGGTTTCGTATGGGCCATCTCTTTGA 52479
Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001
|| | ||||| || |||| ||| || || ||||||||||||||||| | |||
Sbjct 52478 GCTAGCTCACAAGAGGCTTCCATGGAAGCATGGTACATGGTTTCAAAGATTTGTATATTT 52419
Query 111002 A-TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAG 111060
| | | | ||||| || || || |||| | || |||| || || || || |
Sbjct 52418 AGTAAGCGT-GCTTCTTCGGAGTCGAATGGTAAACGCAACAACATGAAAGTGTCAGCCAA 52360
Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAAC 111120
|||||| ||||||||| |||| || ||||||| ||||||||| ||| || ||| ||
Sbjct 52359 ACCTTGGACACCCAAAGCAATCGGCCTGTGTCTCATATTAGATCTTCTTGCTTCCTCGAC 52300
Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180
|||||| | || | |||||| || ||||| || || | || || | |||||
Sbjct 52299 AGGATAATAGTTACGGTCAATAACGTTGTTTAAGTTACGAGTGATAACTTTAGAAATTTC 52240
Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGT------CTCTTCA----TTGACATACTT-- 111228
||| || |||| | | | | || ||| |||||| || ||| |
Sbjct 52239 ATGTAGCTTTTTGAAGTTATATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGC 52180
Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288
||| | || | || ||||| || |||||||| |||||||| | | | ||| || |
Sbjct 52179 TGGCAAAGCAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGAGCGGAGTATTCAAC 52120
Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348
|||||| || ||||| || ||| || ||||| ||||||||||| ||| |
Sbjct 52119 AATTTCACAGCACAAGTTAGACGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCT 52060
Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408
||| || ||||||||||| | | |||| || || || ||||| |||| || | ||
Sbjct 52059 GTTACAAGCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCGTTTGTGCTTCCAATAT 52000
Query 111409 AGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACT 111467
|| | ||| || | | | || | || | || | || || || |||||
Sbjct 51999 AGAGTACCACAATTTTTGGGCCTTG----ATAGTCTTACCACGGCCTTCTTTTTCGTAAC 51944
Query 111468 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCC-TTGTCT 111526
|| || ||||||||||| || ||||| ||| | ||||| ||| |||
Sbjct 51943 GGGTATATAGGGCTTCAAATTCGTCACCGTAGCAGTCACTTAAGCCTGGAGCCGATGT-A 51885
Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586
||| |||| | || ||| || ||| || || |||||||||||||| || |||| |
Sbjct 51884 GGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCGGGAACC 51825
Query 111587 CACAGGGATGAAAAGAGATCTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645
|| || | || || | |||||| ||| || ||||| | ||| || || || |
Sbjct 51824 CATAGAGCTGGGAATAAATCTCTCGCACGGA-TTTCTTCCTTACCGTGATTCTTTCTAAT 51766
Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTC--AAGATAG----ACTGCGATAGA 111699
|| | ||| || | |||||| |||||||||||||| || |||| | || ||
Sbjct 51765 GTCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGG 51706
Query 111700 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759
|| ||| | ||| | || | ||||| || || ||| ||| || || || | |||
Sbjct 51705 TCTCTTGTTA---CCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCAT 51649
Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819
||||| | || | || || || || || ||| ||| | || | |
Sbjct 51648 AGGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAAT 51589
Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879
| || || || | |||||||| ||||| || || || ||||| ||| | |
Sbjct 51588 GTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAA 51529
Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939
||| | |||||||| | || || || ||||| | || | ||||| || ||||||
Sbjct 51528 AGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACAT 51469
Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT- 111998
|| || ||||||||||||| ||||| | ||||| | |||||| | || || ||
Sbjct 51468 TTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGT-AAAGTATTTTA 51410
Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058
|||||||| || || || || | | | ||||||| || ||||| || || | |
Sbjct 51409 GGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACCGTGAATACCTAAGG 51350
Query 112059 CGACCCGCATGAACATGTACTGTGG 112083
|||| | ||||| | || |||||
Sbjct 51349 CGACTCTCATGATTAAGTGTTGTGG 51325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031607480000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |