Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5 185 1e-41
seq3 111 2e-19
>seq5
Length=188055
Score = 185 bits (204), Expect = 1e-41
Identities = 777/1209 (64%), Gaps = 36/1209 (3%)
Strand=Plus/Minus
Query 118343 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 118402
|||||| || || || || |||||||| || ||||| || || | || || || |||||
Sbjct 52551 CCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGGAAGGTTTCGTATGG 52492
Query 118403 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAA 118462
||| || | || | || | || || | || || || ||||| ||||||||
Sbjct 52491 GCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGGTACATGGTTTCAAA 52432
Query 118463 AATGCGAGCATTCATT--GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATA 118520
|| | ||| | | || | || || ||||| || || | | || |||| ||
Sbjct 52431 GATTTGTATATTTAGTAAGCGT--GCTTCTTCGGAGTCGAATGGTAAACGCAACAACATG 52374
Query 118521 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTC 118580
|| || || | |||||||||||| | |||| || | |||||||||||||| |
Sbjct 52373 AAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTCATATTAGATCTT 52314
Query 118581 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 118640
| || ||| || |||||| | || | || ||||| | |||| || |||| |
Sbjct 52313 CTTGCTTCCTCGACAGGATAATAGTTACGGTCAATAACGTTGTTTAAGTTACGAGTGATA 52254
Query 118641 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT------CTTCA--- 118691
|| || | |||||||| ||||||| | | | | | | ||| | |||||
Sbjct 52253 ACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATATGTAGAAGTTTTGCCGTCTTCAGAT 52194
Query 118692 -TTGACATACTTA--GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 118748
|| ||| | || | || | || |||| ||||| |||| |||||||| |
Sbjct 52193 GTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGA 52134
Query 118749 TCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTT 118808
| | ||| || | |||||| ||||||||| || ||| || ||||||||||||
Sbjct 52133 GCGGAGTATTCAACAATTTCACAGCACAAGTTAGACGACTTGATAACACCCAAGTTCTTT 52074
Query 118809 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 118868
|| || || || ||||||| ||||||||||||| | | || || || || ||||||
Sbjct 52073 TGGTTGGATTTCCTGTTACAAGCATCCTTGTAAACAACAAAGGGTGTACCAGTTTCCGTT 52014
Query 118869 TGGGACTTGAGAATAGCCTTCCAGACATC---GGCAGCTGGCACAGTGGCGTTGGCTCGC 118925
|| | | | |||| | ||| | | ||| || | | ||| || | ||
Sbjct 52013 TGTGCTTCCAATATAGAGTACCACAATTTTTGGGC--CTTG-ATAGTC---TTACCACGG 51960
Query 118926 CCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACG--GCCTCTGAGA 118983
|| |||| ||||| || || ||||||||||| || ||||| | | | || | |
Sbjct 51959 CCTTCTTTTTCGTAACGGGTATATAGGGCTTCAAATTCGTCACCGTAGCAGTCACTTA-A 51901
Query 118984 GCCCTGGTGCCTTATCTGGGC-AGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTC 119042
||| ||| ||| || | || |||| | || ||| || || || || ||||||
Sbjct 51900 GCC-TGGAGCCG-ATGTAGGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTC 51843
Query 119043 ATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCC 119102
||||| || || || | ||| || || | ||| | ||| | || |||||| |
Sbjct 51842 ATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACGGATTTCTTCCTTA 51783
Query 119103 CCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTAC 119162
|| ||||| | | || | ||||| | |||||| |||||||| || |||| ||
Sbjct 51782 CCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATAT 51723
Query 119163 ACCGCGATTG-ACCCCTTACGACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTA 119219
| || | | ||| | | |||| |||||| ||||| | |||||| |||
Sbjct 51722 AGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATAACGGGCAGTGTTGTTG 51663
Query 119220 AATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGAC 119279
|| ||||| | ||| ||||| | || | || || || || || ||| |||
Sbjct 51662 AAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAG 51603
Query 119280 TTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 119339
| || | | | ||| || || | ||||||||| || || || || ||
Sbjct 51602 CCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAA 51543
Query 119340 GCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGG 119399
|| || ||| | | | || ||||||| || || || || ||| |||| |||| | |||
Sbjct 51542 GCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGG 51483
Query 119400 AAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGG 119459
|| ||| |||||||||||| | ||||||||||||||||| | |||||| | |||||
Sbjct 51482 AAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGA 51423
Query 119460 ATGAACATACCTT-GGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCC 119518
| || || || |||||||| || ||||| || | |||| ||||| || ||
Sbjct 51422 GTAAAG-TATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTATCACC 51364
Query 119519 GTGAATACC 119527
|||||||||
Sbjct 51363 GTGAATACC 51355
>seq3
Length=553868
Score = 111 bits (122), Expect = 2e-19
Identities = 136/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 167937 CCAGTAGGTGTCTACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAGAGTGGTATC 167996
||||| ||| ||||||| | | ||||||||||| || || || ||||| | |||||
Sbjct 462686 CCAGTCGGTACCTACGGTAGAATCGCGCCAAGATCAGGCCTAGCAGTGAAAAACGGTATT 462745
Query 167997 CAAGTTGGTGCGGGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTCGTTCTCTTC 168056
||| ||||| |||||||| || |||||| || ||||||||||| || | | ||
Sbjct 462746 CAAACGGGTGCTGGTGTTGTCGACAGAGACTACACCGGTGAAGTCAAGGTTATCTTATTT 462805
Query 168057 AATCACGGGCACACAGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAACTCATCTTA 168116
||||| || | |||||| |||||||| || ||||| ||||| ||| | |||||
Sbjct 462806 AATCATTCACAGAAGGATTTCGCGATCAAAAAAGGTGATCGTATCGCCCAATTGATCTTG 462865
Query 168117 GAGAGG 168122
|| |||
Sbjct 462866 GAAAGG 462871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434813478000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |