Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq17 104 3e-17
seq5 89.7 6e-13
>seq17
Length=290845
Score = 104 bits (114), Expect = 3e-17
Identities = 536/849 (63%), Gaps = 11/849 (1%)
Strand=Plus/Minus
Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116
|| || | ||| || || || || || || ||| |||| ||||| |||||| |||
Sbjct 196148 GAAGCTAAGTTACAAACAGCTGTTTCATCTGGGGAAGAATACTCGACGATTTCGCAACAC 196089
Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176
| ||| ||||| ||||| || || | ||| | ||||||| |||| |||||| |||||
Sbjct 196088 AGATTCGACGATTTGATAGTACCCAAGTTTTGCTGGTTGGTCTTTCTGTTACAAGCGTCT 196029
Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGA-ACGCCGTCCCAGAT 79235
||||| |||| | ||||| ||||| || || |||| | | | ||| ||| |
Sbjct 196028 TTGTAAACCATGAATGGCGTACCGGTTTCTGTTTGTG-CTTGTAAGATGGCGTACCACAC 195970
Query 79236 GTCCCGGGCCCGGACAACCTTCTTGTACC--GACCCTGTGCGACGTACGTCCGGTACAAC 79293
| ||||| || | || |||| |||| | | |||| ||| | |
Sbjct 195969 TTTTTGGGCCTTGA-----TGGTTTTACCACGACCTTCTCTTTCGTAACGGGTGTATAGC 195915
Query 79294 TCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGG-CACTCGTGCGGGCACATCAG 79352
|| | ||| | || || | || ||| || || ||| || | | | | || |
Sbjct 195914 TCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGAACTTGGTGAAAATAGG 195855
Query 79353 GTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGT 79412
|| |||| || | |||| || || || |||||| || || || ||||| ||||| |
Sbjct 195854 GT-CCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGGGCAGG 195796
Query 79413 GAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTC 79472
||| | || | ||| || || || | || || | | | || | ||||||
Sbjct 195795 GAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTTTTTCTGATATCAACAAAGTC 195736
Query 79473 CATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCC 79532
| |||||| || ||||| ||||||| | | ||| || | ||| | |||| ||
Sbjct 195735 GAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACC 195676
Query 79533 GCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTC 79592
|| |||| ||||| || || ||||| ||||| || |||| |||||| | | || |
Sbjct 195675 ACCTTGGTCCACGTAACGTGCAGTGTTATTGAAGACACGGATCATGGGAATCAACCCATT 195616
Query 79593 GGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGAT 79652
| ||||| || || || | || | | ||||| || | || |
Sbjct 195615 TGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAG 195556
Query 79653 TCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCC 79712
|| | || || | |||||| || || ||||| || | || ||||| || ||
Sbjct 195555 ACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACC 195496
Query 79713 CTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGT 79772
||||| |||||||||||||| || | |||||| || ||||| || |||| |||
Sbjct 195495 TTCGATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGGTGTGGCGT 195436
Query 79773 ACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTA 79832
|||||| || || || || || | ||||| |||||| | | ||||| | |||
Sbjct 195435 ACCGGCATTAAATAGAGTGGGGGAAGCGTGAGTGAAGTATCTCAATGACATCAAGTTGTA 195376
Query 79833 CGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAG 79892
|||| | ||| | || |||| |||||||| || | || || ||||||| ||
Sbjct 195375 AGTCTTCAGCACGGACTCGATGTCGCTACCGTGGATACCCAGGGCCACACGCATGACCAG 195316
Query 79893 GTACTGGGG 79901
| |||||
Sbjct 195315 ATGTTGGGG 195307
>seq5
Length=188055
Score = 89.7 bits (98), Expect = 6e-13
Identities = 281/432 (65%), Gaps = 10/432 (2%)
Strand=Plus/Plus
Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGC----GAGACA 19171
||||| ||||||| | || || || || || || | ||| |||| || ||
Sbjct 51338 TCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATT----GAGGCCGCTCTAGAAACC 51393
Query 19172 TACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGT 19231
|| || ||||| || || | ||| || ||||| | || || | |||||||| |||
Sbjct 51394 TATAACTTGATGTCCCTAAAATACTTTACTCACGCCTCTCCAACTTTATTCAACGCTGGT 51453
Query 19232 ACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAG 19291
|| || || || ||||| |||||||||||| || ||||||||||| ||||||
Sbjct 51454 ACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGATTCCATTGAA 51513
Query 19292 GGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351
|| |||||||| || | ||||| || || || ||||| | || ||||| ||
Sbjct 51514 GGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGT 51573
Query 19352 ATCCACTGCTC-GAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGC 19410
| || | || || || || | | || | || ||| |||||||| |
Sbjct 51574 CTACA-TATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAACGGGACTTC 51632
Query 19411 CGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGG 19470
|||| | | || ||| |||| |||||||||||||| ||| | || || |||||||
Sbjct 51633 TAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGTTGACCAGGG 51692
Query 19471 GGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCAT 19530
|| ||| | || | || || | || | |||||||||||||| || || |
Sbjct 51693 TGGTAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTT 51752
Query 19531 GGATTTCCTCGA 19542
|| ||| ||||
Sbjct 51753 CGACTTCATCGA 51764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524457172000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |