Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq17 104 3e-17 seq5 89.7 6e-13 >seq17 Length=290845 Score = 104 bits (114), Expect = 3e-17 Identities = 536/849 (63%), Gaps = 11/849 (1%) Strand=Plus/Minus Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116 || || | ||| || || || || || || ||| |||| ||||| |||||| ||| Sbjct 196148 GAAGCTAAGTTACAAACAGCTGTTTCATCTGGGGAAGAATACTCGACGATTTCGCAACAC 196089 Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176 | ||| ||||| ||||| || || | ||| | ||||||| |||| |||||| ||||| Sbjct 196088 AGATTCGACGATTTGATAGTACCCAAGTTTTGCTGGTTGGTCTTTCTGTTACAAGCGTCT 196029 Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGA-ACGCCGTCCCAGAT 79235 ||||| |||| | ||||| ||||| || || |||| | | | ||| ||| | Sbjct 196028 TTGTAAACCATGAATGGCGTACCGGTTTCTGTTTGTG-CTTGTAAGATGGCGTACCACAC 195970 Query 79236 GTCCCGGGCCCGGACAACCTTCTTGTACC--GACCCTGTGCGACGTACGTCCGGTACAAC 79293 | ||||| || | || |||| |||| | | |||| ||| | | Sbjct 195969 TTTTTGGGCCTTGA-----TGGTTTTACCACGACCTTCTCTTTCGTAACGGGTGTATAGC 195915 Query 79294 TCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGG-CACTCGTGCGGGCACATCAG 79352 || | ||| | || || | || ||| || || ||| || | | | | || | Sbjct 195914 TCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGAACTTGGTGAAAATAGG 195855 Query 79353 GTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGT 79412 || |||| || | |||| || || || |||||| || || || ||||| ||||| | Sbjct 195854 GT-CCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGGGCAGG 195796 Query 79413 GAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTC 79472 ||| | || | ||| || || || | || || | | | || | |||||| Sbjct 195795 GAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTTTTTCTGATATCAACAAAGTC 195736 Query 79473 CATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCC 79532 | |||||| || ||||| ||||||| | | ||| || | ||| | |||| || Sbjct 195735 GAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACC 195676 Query 79533 GCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTC 79592 || |||| ||||| || || ||||| ||||| || |||| |||||| | | || | Sbjct 195675 ACCTTGGTCCACGTAACGTGCAGTGTTATTGAAGACACGGATCATGGGAATCAACCCATT 195616 Query 79593 GGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGAT 79652 | ||||| || || || | || | | ||||| || | || | Sbjct 195615 TGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGAAG 195556 Query 79653 TCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCC 79712 || | || || | |||||| || || ||||| || | || ||||| || || Sbjct 195555 ACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACC 195496 Query 79713 CTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGT 79772 ||||| |||||||||||||| || | |||||| || ||||| || |||| ||| Sbjct 195495 TTCGATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGGTGTGGCGT 195436 Query 79773 ACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTA 79832 |||||| || || || || || | ||||| |||||| | | ||||| | ||| Sbjct 195435 ACCGGCATTAAATAGAGTGGGGGAAGCGTGAGTGAAGTATCTCAATGACATCAAGTTGTA 195376 Query 79833 CGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAG 79892 |||| | ||| | || |||| |||||||| || | || || ||||||| || Sbjct 195375 AGTCTTCAGCACGGACTCGATGTCGCTACCGTGGATACCCAGGGCCACACGCATGACCAG 195316 Query 79893 GTACTGGGG 79901 | ||||| Sbjct 195315 ATGTTGGGG 195307 >seq5 Length=188055 Score = 89.7 bits (98), Expect = 6e-13 Identities = 281/432 (65%), Gaps = 10/432 (2%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGC----GAGACA 19171 ||||| ||||||| | || || || || || || | ||| |||| || || Sbjct 51338 TCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATT----GAGGCCGCTCTAGAAACC 51393 Query 19172 TACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGT 19231 || || ||||| || || | ||| || ||||| | || || | |||||||| ||| Sbjct 51394 TATAACTTGATGTCCCTAAAATACTTTACTCACGCCTCTCCAACTTTATTCAACGCTGGT 51453 Query 19232 ACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAG 19291 || || || || ||||| |||||||||||| || ||||||||||| |||||| Sbjct 51454 ACACCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGATTCCATTGAA 51513 Query 19292 GGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351 || |||||||| || | ||||| || || || ||||| | || ||||| || Sbjct 51514 GGTATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGT 51573 Query 19352 ATCCACTGCTC-GAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGC 19410 | || | || || || || | | || | || ||| |||||||| | Sbjct 51574 CTACA-TATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAACGGGACTTC 51632 Query 19411 CGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGG 19470 |||| | | || ||| |||| |||||||||||||| ||| | || || ||||||| Sbjct 51633 TAACGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGTTGACCAGGG 51692 Query 19471 GGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCAT 19530 || ||| | || | || || | || | |||||||||||||| || || | Sbjct 51693 TGGTAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTT 51752 Query 19531 GGATTTCCTCGA 19542 || ||| |||| Sbjct 51753 CGACTTCATCGA 51764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524457172000