Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq5 170 2e-37 seq17 134 2e-26 seq24 120 3e-22 >seq5 Length=188055 Score = 170 bits (188), Expect = 2e-37 Identities = 348/509 (68%), Gaps = 6/509 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 ||||| | |||||||| ||||| |||||||| || | | || || || || || Sbjct 51338 TCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCTCTA-GAAACCTAT 51396 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 |||| ||| || ||| |||||||| |||||| | ||||| | |||||||||||||| Sbjct 51397 AACTTGATGTCCCTAAAATACTTTACTCACGCCTCTCCAACTTTATTCAACGCTGGTACA 51456 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | ||||| ||||| ||| ||||| || || ||||||||||| || || || || Sbjct 51457 CCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGATTCCATTGAAGGT 51516 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 |||||||| || | ||||| ||||| || ||||| | |||||||| ||| | Sbjct 51517 ATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTA 51576 Query 53432 CACTGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || | || ||| | ||||| | |||| | || || |||||||| | | Sbjct 51577 CA-TATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAACGGGACTTCTAA 51635 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || | | |||||| |||| |||||||||||||| ||||| || || |||||||||| Sbjct 51636 CGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGTTGACCAGGGTGG 51695 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 | ||| | || | || || | || | ||||| |||||||| || || | || Sbjct 51696 TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTTCGA 51755 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTA 53669 || |||| | | |||||| ||| | ||||| || || ||| | || | || Sbjct 51756 CTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TGCGAGAGATTTATTCC 51814 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATG 53698 ||||||| ||| |||| || || |||||| Sbjct 51815 CAGCTCTATGGGTTCCCGATCTTTTCATG 51843 >seq17 Length=290845 Score = 134 bits (148), Expect = 2e-26 Identities = 342/517 (66%), Gaps = 10/517 (2%) Strand=Plus/Plus Query 53187 ATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTG--- 53243 |||| ||||||| || ||| |||||||||||||| |||| || ||||||| Sbjct 195314 ATCTGGTCATGCGTGTGGCCCTGGGTATCCACGGTAGCGAC----ATCGAGTCCGTGCTG 195369 Query 53244 -AGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 |||| ||| |||| ||| | ||||| || ||||| | || || || || || Sbjct 195370 AAGACTTACAACTTGATGTCATTGAGATACTTCACTCACGCTTCCCCCACTCTATTTAAT 195429 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 || |||||| |||||||| ||||| || |||||| | || |||||||| ||||| Sbjct 195430 GCCGGTACGCCACACCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCC 195489 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 ||||| || || ||||| || | || ||||||||| || |||||| | |||||| Sbjct 195490 ATCGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGT 195549 Query 53423 ATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGC 53482 | ||| | || | || | ||| | | ||| | || || || ||||| Sbjct 195550 GTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGT 195609 Query 53483 GTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAAC 53542 | |||| | | || ||| |||| |||||||| ||||| || || ||||| || Sbjct 195610 ACTTCAAATGGGTTGATTCCCATGATCCGTGTCTTCAATAACACTGCACGTTACGTGGAC 195669 Query 53543 CAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGAC 53602 || |||||| ||| | || | || ||| | | | | ||||| ||||| || ||| Sbjct 195670 CAAGGTGGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGAC 195729 Query 53603 ATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGA 53661 || | || ||| | || | | | ||| ||| | ||||| || || ||| | || Sbjct 195730 ATCTTCGACTTTGTTGATATCAGAAAAACTCATGGTAAGGAAGAAATTCG-TGCAAGAGA 195788 Query 53662 CCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 |||| | || || |||||||| || || |||||| Sbjct 195789 TTTGTTCCCTGCCCTATGGATTCCTGATCTTTTCATG 195825 >seq24 Length=351367 Score = 120 bits (132), Expect = 3e-22 Identities = 295/437 (68%), Gaps = 13/437 (3%) Strand=Plus/Minus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || ||| | ||||| ||||||| |||| ||| || || || | | || Sbjct 17367 GGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAACC 17308 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| | || | ||||||||||| ||||||| |||||| || |||||||| Sbjct 17307 GGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAGAC 17248 Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----A 74925 ||||||| | || || ||||| || | || ||||| | ||||||| ||| | Sbjct 17247 ACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGG-CGTCCTGGA 17189 Query 74926 TCCAAGTCTGAGCCCATTCAG-CTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGG 74984 |||| | | |||||||| | ||| ||| || | |||| || ||||| || | | Sbjct 17188 TCCATCTAAGGGCCCATTCGGCCTTCTCG-CAGATTTCTGGGATGGTGTCGATGGCGTTG 17130 Query 74985 AAGAGG--CTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042 || | | || || ||| ||| ||| ||||||| | |||| |||| | ||||| | Sbjct 17129 AACAAGAACTCGCTTTC-CTT-GGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAGG 17072 Query 75043 TCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101 | || || || || |||| | ||| |||| || |||||||| | ||||| | Sbjct 17071 TTTCGGAGTGGATGTTCTCGAT-CGCGATCTGGAACCCGTAGAAACTCTTGGCCTCCGGG 17013 Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161 ||||| || || | || || ||| | | | || || ||||||| ||||| |||||| Sbjct 17012 ATCTGGACCTCGGTGGAGAAGTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGCG 16953 Query 75162 GCGAAAAAAGCCAGTAC 75178 ||||| || || || || Sbjct 16952 GCGAAGAAGGCAAGCAC 16936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215657990000