Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq5 170 2e-37
seq17 134 2e-26
seq24 120 3e-22
>seq5
Length=188055
Score = 170 bits (188), Expect = 2e-37
Identities = 348/509 (68%), Gaps = 6/509 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251
||||| | |||||||| ||||| |||||||| || | | || || || || ||
Sbjct 51338 TCATGAGAGTCGCCTTAGGTATTCACGGTGATAACATTGAGGCCGCTCTA-GAAACCTAT 51396
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
|||| ||| || ||| |||||||| |||||| | ||||| | ||||||||||||||
Sbjct 51397 AACTTGATGTCCCTAAAATACTTTACTCACGCCTCTCCAACTTTATTCAACGCTGGTACA 51456
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
| ||||| ||||| ||| ||||| || || ||||||||||| || || || ||
Sbjct 51457 CCAAAGCCTCAAATGTCCTCCTGTTTCCTAGTTGCAATGAAGGATGATTCCATTGAAGGT 51516
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|||||||| || | ||||| ||||| || ||||| | |||||||| ||| |
Sbjct 51517 ATCTACGACACTTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTA 51576
Query 53432 CACTGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| | || ||| | ||||| | |||| | || || |||||||| | |
Sbjct 51577 CA-TATTCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACGAACGGGACTTCTAA 51635
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| | | |||||| |||| |||||||||||||| ||||| || || ||||||||||
Sbjct 51636 CGGGTTAATTCCTATGATCCGTGTCTTCAACAACACTGCCCGTTATGTTGACCAGGGTGG 51695
Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
| ||| | || | || || | || | ||||| |||||||| || || | ||
Sbjct 51696 TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTTCGA 51755
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTA 53669
|| |||| | | |||||| ||| | ||||| || || ||| | || | ||
Sbjct 51756 CTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TGCGAGAGATTTATTCC 51814
Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATG 53698
||||||| ||| |||| || || ||||||
Sbjct 51815 CAGCTCTATGGGTTCCCGATCTTTTCATG 51843
>seq17
Length=290845
Score = 134 bits (148), Expect = 2e-26
Identities = 342/517 (66%), Gaps = 10/517 (2%)
Strand=Plus/Plus
Query 53187 ATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTG--- 53243
|||| ||||||| || ||| |||||||||||||| |||| || |||||||
Sbjct 195314 ATCTGGTCATGCGTGTGGCCCTGGGTATCCACGGTAGCGAC----ATCGAGTCCGTGCTG 195369
Query 53244 -AGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
|||| ||| |||| ||| | ||||| || ||||| | || || || || ||
Sbjct 195370 AAGACTTACAACTTGATGTCATTGAGATACTTCACTCACGCTTCCCCCACTCTATTTAAT 195429
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
|| |||||| |||||||| ||||| || |||||| | || |||||||| |||||
Sbjct 195430 GCCGGTACGCCACACCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCC 195489
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
||||| || || ||||| || | || ||||||||| || |||||| | ||||||
Sbjct 195490 ATCGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGT 195549
Query 53423 ATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGC 53482
| ||| | || | || | ||| | | ||| | || || || |||||
Sbjct 195550 GTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGT 195609
Query 53483 GTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAAC 53542
| |||| | | || ||| |||| |||||||| ||||| || || ||||| ||
Sbjct 195610 ACTTCAAATGGGTTGATTCCCATGATCCGTGTCTTCAATAACACTGCACGTTACGTGGAC 195669
Query 53543 CAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGAC 53602
|| |||||| ||| | || | || ||| | | | | ||||| ||||| || |||
Sbjct 195670 CAAGGTGGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGAC 195729
Query 53603 ATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGA 53661
|| | || ||| | || | | | ||| ||| | ||||| || || ||| | ||
Sbjct 195730 ATCTTCGACTTTGTTGATATCAGAAAAACTCATGGTAAGGAAGAAATTCG-TGCAAGAGA 195788
Query 53662 CCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698
|||| | || || |||||||| || || ||||||
Sbjct 195789 TTTGTTCCCTGCCCTATGGATTCCTGATCTTTTCATG 195825
>seq24
Length=351367
Score = 120 bits (132), Expect = 3e-22
Identities = 295/437 (68%), Gaps = 13/437 (3%)
Strand=Plus/Minus
Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809
|||||| || ||| | ||||| ||||||| |||| ||| || || || | | ||
Sbjct 17367 GGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAGTTCGTTGGAGAAGGTCAAACC 17308
Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869
||||| | || | ||||||||||| ||||||| |||||| || ||||||||
Sbjct 17307 GGGCATCATACCTCTTTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAGAC 17248
Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----A 74925
||||||| | || || ||||| || | || ||||| | ||||||| ||| |
Sbjct 17247 ACCTTCGATGGAGGCGAACGCGACCAGTCTTTCACCGAACAGGGCATCGG-CGTCCTGGA 17189
Query 74926 TCCAAGTCTGAGCCCATTCAG-CTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGG 74984
|||| | | |||||||| | ||| ||| || | |||| || ||||| || | |
Sbjct 17188 TCCATCTAAGGGCCCATTCGGCCTTCTCG-CAGATTTCTGGGATGGTGTCGATGGCGTTG 17130
Query 74985 AAGAGG--CTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042
|| | | || || ||| ||| ||| ||||||| | |||| |||| | ||||| |
Sbjct 17129 AACAAGAACTCGCTTTC-CTT-GGGGTCCTTGATGTAGGTGTCGATCAACAAGGAGTAGG 17072
Query 75043 TCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCA 75101
| || || || || |||| | ||| |||| || |||||||| | ||||| |
Sbjct 17071 TTTCGGAGTGGATGTTCTCGAT-CGCGATCTGGAACCCGTAGAAACTCTTGGCCTCCGGG 17013
Query 75102 ATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCG 75161
||||| || || | || || ||| | | | || || ||||||| ||||| ||||||
Sbjct 17012 ATCTGGACCTCGGTGGAGAAGTTCTCGACCAAGTTTTCGTTGACGATACCGTCGGAGGCG 16953
Query 75162 GCGAAAAAAGCCAGTAC 75178
||||| || || || ||
Sbjct 16952 GCGAAGAAGGCAAGCAC 16936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215657990000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |