Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07] 50 sequences; 11,623,528 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq19 152 6e-32 seq17 143 3e-29 seq14 136 5e-27 seq16 129 7e-25 seq40 113 5e-20 seq5 95.1 1e-14 >seq19 Length=415998 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| |||||||| || | || || |||||||| ||| | ||||| || || | Sbjct 67758 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAGACTATCACTTTAGAGGTCGAATCTTCT 67699 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||| ||| || ||||||||||| || |||||||||||||| Sbjct 67698 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAA 67639 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||| || || ||||| || |||| | | || || |||||||||| Sbjct 67638 CAGAGATTGATTTTTGCAGGGAAACAACTGGAAGATGGTAGAACGCTGTCAGACTATAAC 67579 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||| || ||||| | ||| || | || | ||||| Sbjct 67578 ATTCAAAAGGAATCTACCCTTCACTTGGTCCTGAGACTAAGAGGTGG 67532 Score = 145 bits (160), Expect = 9e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || || || |||||||||||| | ||||| || || | Sbjct 68442 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 68383 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | || | ||| | ||||| ||||||||||| || |||||||| ||||| Sbjct 68382 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 68323 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | ||||| |||||||| ||||| || || | | | || || | || || || Sbjct 68322 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGATTACAAC 68263 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | |||||||||||||||||||| Sbjct 68262 ATTCAAAAGGAATCCACTCTTCA 68240 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || || || || |||||||| ||| | ||||| || || | Sbjct 68214 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACTATCACTTTGGAGGTCGAATCTTCT 68155 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||| ||| || ||||||||||| || |||||||||||||| Sbjct 68154 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAA 68095 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||| ||||| || | || |||| | | || || | || || || Sbjct 68094 CAGAGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTAGAACGCTGTCGGATTACAAC 68035 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | ||||||||||| || ||||| Sbjct 68034 ATTCAAAAGGAATCTACCCTTCA 68012 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || || ||||| ||||| || || | |||||||| | | Sbjct 67986 ATGCAGATTTTTGTCAAAACTCTGACCGGTAAGACCATAACCTTGGAGGTTGAATATTCT 67927 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| |||| || ||||||||||| || |||||||| ||||| Sbjct 67926 GACACCATCGATAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 67867 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | ||||| |||||||| ||||| || || | | | || ||| | || || || Sbjct 67866 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCGGATTACAAC 67807 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | ||||| || ||||||||||| Sbjct 67806 ATTCAAAAAGAGTCCACTCTTCA 67784 >seq17 Length=290845 Score = 143 bits (158), Expect = 3e-29 Identities = 523/803 (65%), Gaps = 32/803 (4%) Strand=Plus/Minus Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 ||||||||||||| |||| ||| || || || || ||||||| ||||| |||||| | Sbjct 196108 ACTCGACGATTTCGCAACACAGATTCGACGATTTGATAGTACCCAAGTTTTGCTGGTTGG 196049 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||| ||| |||||||| ||||| |||| | || |||||||| || |||| || Sbjct 196048 TCTTTCTGTTACAAGCGTCTTTGTAAACCATGAATGGCGTACCGGTTTCTGTTTGTG-CT 195990 Query 81068 TG-AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGC--GGAATTTGCCTTCGG 81124 || | |||||||| ||| | | | ||||||| || | || ||||| Sbjct 195989 TGTAAGATGGCGTACCACACTTTTTGGGCCTTGATGGTTTTACCACGA-----CCTTCTC 195935 Query 81125 CCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCT-GG 81182 | || || ||| ||| || ||||| | |||| || || | || || Sbjct 195934 TTTCGTAACGGGTGTATAGC-TCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGG 195876 Query 81183 GCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGC 81242 ||| || | | | || ||| |||| | || | || ||| |||||||||| Sbjct 195875 GCAGAACTTGGTGAAAAT-AGGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAG 195817 Query 81243 GTCAGGGATCCAGAGGGCGGTGAACAGGTCGC-GGCAGCGCGCCTCCTCATCACCCTGGT 81301 ||||| ||||| ||||| | ||||| || | ||| || || || | ||| || Sbjct 195816 ATCAGGAATCCATAGGGCAGGGAACAAATCTCTTGCA-CGAATTTCTTCCTTACCATGAG 195758 Query 81302 TGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGA 81361 | | | || | |||||| | |||||| |||||||||||||||| | | ||| | Sbjct 195757 TTTTTCTGATATCAACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAA 195698 Query 81362 TCG-AC-----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATA 81415 | || | |||| | ||||| |||| |||||||| ||||| || || | Sbjct 195697 AGGCACCGGGTCTCTTGTTA---CCACCTTGGTCCACGTAACGTGCAGTGTTATTGAAGA 195641 Query 81416 CACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCT 81475 |||| | ||| || || | |||| ||| |||||| ||||| | ||| || || Sbjct 195640 CACGGATCATGGGAATCAACCCATTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTG 195581 Query 81476 TGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCAC 81535 ||| || | ||| |||| |||||| | ||||||| ||| |||||| |||| Sbjct 195580 TGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCAC 195521 Query 81536 ACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAAC 81595 || |||| || || ||||| || |||||| || | |||||| ||| || ||||| Sbjct 195520 ACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGTCGTCCTTCATGGCAATCAGGAAAC 195461 Query 81596 AGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGA 81655 | ||||| |||||| | | |||||||| || || || |||| |||||| ||| Sbjct 195460 AAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAAATAGAGTGGGGGAAGCGTGAGTGA 195401 Query 81656 AATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGA----ATATCGTCACCG 81711 | || | |||||||| || || || ||| | || ||| || ||| |||| Sbjct 195400 AGTATCTCAATGACATCAAGTTGTAAGT---CTTCA-GCACGGACTCGATGTCGCTACCG 195345 Query 81712 TGAATACCGATAGCTACACGCAT 81734 || ||||| | || |||||||| Sbjct 195344 TGGATACCCAGGGCCACACGCAT 195322 >seq14 Length=538356 Score = 136 bits (150), Expect = 5e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | ||||| ||||||||||| ||||| ||||| || Sbjct 529688 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCA 529629 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||| |||| ||||| |||||||| || ||||| || ||||| Sbjct 529628 GACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAA 529569 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || || | | || | | ||||| || Sbjct 529568 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTACAAC 529509 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| |||||| | || | |||||| Sbjct 529508 ATCCAAAAGGAGTCCACTTTACACTTGGTCTTG 529476 >seq16 Length=189800 Score = 129 bits (142), Expect = 7e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 |||||||| || | || || ||||| || ||| | || ||||| || ||| | ||| Sbjct 50626 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 50685 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || ||||| |||||||| || || ||||| ||||| || | || Sbjct 50686 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 50745 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || || | | | ||| | | ||||| || |||||||| Sbjct 50746 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAG 50805 Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618 ||||||||| | ||| |||||||| Sbjct 50806 GAATCCACTTTACATTTAGTCTTG 50829 >seq40 Length=705427 Score = 113 bits (124), Expect = 5e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| | || || ||||| || ||||| || ||||| || ||| | ||| Sbjct 667916 CTTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCAT 667857 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 || ||| | || | || ||||| ||||| || || || || || ||||| || | | Sbjct 667856 TGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATT 667797 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || ||||||||||||||| | || || | | | ||| | | ||||| || | ||||| Sbjct 667796 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAA 667737 Query 27594 GGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| | ||| |||||||| Sbjct 667736 GGAATCCACTTTACATTTAGTCTTG 667712 >seq5 Length=188055 Score = 95.1 bits (104), Expect = 1e-14 Identities = 277/419 (66%), Gaps = 21/419 (5%) Strand=Plus/Minus Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC----- 81366 |||| ||||| | ||| || || ||||||||||||| ||| | || | | || Sbjct 51764 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGT 51705 Query 81367 CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426 | |||| | |||||||||| || ||||||||||| ||| || ||||| | |||| Sbjct 51704 CTCTTGTTA---CCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATA 51648 Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACC 81486 || || | || | || ||||||||||| | || || || | || || | Sbjct 51647 GGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATG 51588 Query 81487 TTGCTGATTGAAAGACCGATGCCACCTGACCACTTT--GAAATCTGAGCACACCGGTTCA 81544 ||| || ||||| || ||||| | || ||| |||||| |||||| |||| Sbjct 51587 TTGTGAATATGTAGACCAATACCACC--AGCAGTTTTGGAAATCAAAGCACATTCCTTCA 51530 Query 81545 TGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACA 81604 || || || || || || ||| ||| | ||||| ||| | ||||||| |||| Sbjct 51529 AAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACA 51470 Query 81605 TCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGT 81664 | ||||| || || || || ||||| | ||||| | |||||| | || || | Sbjct 51469 TTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTA---TT 51413 Query 81665 TT---GACATCAGGTCATAGGTTTCCTTGA-CGCGTGGAATATCGTCACCGTGAATACC 81719 || ||||||| || |||||||| || || || ||| | |||||||||||||| Sbjct 51412 TTAGGGACATCAAGTTATAGGTTT-CTAGAGCGGCCTCAATGTTATCACCGTGAATACC 51355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310043556000