Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq19 152 6e-32
seq17 143 3e-29
seq14 136 5e-27
seq16 129 7e-25
seq40 113 5e-20
seq5 95.1 1e-14
>seq19
Length=415998
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| |||||||| || | || || |||||||| ||| | ||||| || || |
Sbjct 67758 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAGACTATCACTTTAGAGGTCGAATCTTCT 67699
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| ||||| ||| || ||||||||||| || ||||||||||||||
Sbjct 67698 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAA 67639
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | |||||||| || || ||||| || |||| | | || || ||||||||||
Sbjct 67638 CAGAGATTGATTTTTGCAGGGAAACAACTGGAAGATGGTAGAACGCTGTCAGACTATAAC 67579
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||||||||| || ||||| | ||| || | || | |||||
Sbjct 67578 ATTCAAAAGGAATCTACCCTTCACTTGGTCCTGAGACTAAGAGGTGG 67532
Score = 145 bits (160), Expect = 9e-30
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || || || |||||||||||| | ||||| || || |
Sbjct 68442 ATGCAAATTTTCGTCAAGACACTGACTGGTAAGACTATTACTTTGGAGGTCGAATCTTCT 68383
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | || | ||| | ||||| ||||||||||| || |||||||| |||||
Sbjct 68382 GATACTATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAAGGCATTCCTCCGGACCAA 68323
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | ||||| |||||||| ||||| || || | | | || || | || || ||
Sbjct 68322 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTGTCGGATTACAAC 68263
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| ||||||||||||||||||||
Sbjct 68262 ATTCAAAAGGAATCCACTCTTCA 68240
Score = 132 bits (146), Expect = 5e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || |||||||| || || || || |||||||| ||| | ||||| || || |
Sbjct 68214 ATGCAGATTTTTGTCAAAACTCTAACTGGTAAGACTATCACTTTGGAGGTCGAATCTTCT 68155
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| ||||| ||| || ||||||||||| || ||||||||||||||
Sbjct 68154 GACACCATAGACAATGTGAAGAGTAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAA 68095
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | |||||||| ||||| || | || |||| | | || || | || || ||
Sbjct 68094 CAGAGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTAGAACGCTGTCGGATTACAAC 68035
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| ||||||||||| || |||||
Sbjct 68034 ATTCAAAAGGAATCTACCCTTCA 68012
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || |||||||| || || ||||| ||||| || || | |||||||| | |
Sbjct 67986 ATGCAGATTTTTGTCAAAACTCTGACCGGTAAGACCATAACCTTGGAGGTTGAATATTCT 67927
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| |||| || ||||||||||| || |||||||| |||||
Sbjct 67926 GACACCATCGATAACGTCAAGTCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 67867
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | ||||| |||||||| ||||| || || | | | || ||| | || || ||
Sbjct 67866 CAGAGGTTGATTTTCGCTGGTAAACAACTGGAAGACGGTAGAACGCTATCGGATTACAAC 67807
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| ||||| || |||||||||||
Sbjct 67806 ATTCAAAAAGAGTCCACTCTTCA 67784
>seq17
Length=290845
Score = 143 bits (158), Expect = 3e-29
Identities = 523/803 (65%), Gaps = 32/803 (4%)
Strand=Plus/Minus
Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007
||||||||||||| |||| ||| || || || || ||||||| ||||| |||||| |
Sbjct 196108 ACTCGACGATTTCGCAACACAGATTCGACGATTTGATAGTACCCAAGTTTTGCTGGTTGG 196049
Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067
||| ||| |||||||| ||||| |||| | || |||||||| || |||| ||
Sbjct 196048 TCTTTCTGTTACAAGCGTCTTTGTAAACCATGAATGGCGTACCGGTTTCTGTTTGTG-CT 195990
Query 81068 TG-AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGC--GGAATTTGCCTTCGG 81124
|| | |||||||| ||| | | | ||||||| || | || |||||
Sbjct 195989 TGTAAGATGGCGTACCACACTTTTTGGGCCTTGATGGTTTTACCACGA-----CCTTCTC 195935
Query 81125 CCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCT-GG 81182
| || || ||| ||| || ||||| | |||| || || | || ||
Sbjct 195934 TTTCGTAACGGGTGTATAGC-TCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGG 195876
Query 81183 GCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGC 81242
||| || | | | || ||| |||| | || | || ||| ||||||||||
Sbjct 195875 GCAGAACTTGGTGAAAAT-AGGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAG 195817
Query 81243 GTCAGGGATCCAGAGGGCGGTGAACAGGTCGC-GGCAGCGCGCCTCCTCATCACCCTGGT 81301
||||| ||||| ||||| | ||||| || | ||| || || || | ||| ||
Sbjct 195816 ATCAGGAATCCATAGGGCAGGGAACAAATCTCTTGCA-CGAATTTCTTCCTTACCATGAG 195758
Query 81302 TGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGA 81361
| | | || | |||||| | |||||| |||||||||||||||| | | ||| |
Sbjct 195757 TTTTTCTGATATCAACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAA 195698
Query 81362 TCG-AC-----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATA 81415
| || | |||| | ||||| |||| |||||||| ||||| || || |
Sbjct 195697 AGGCACCGGGTCTCTTGTTA---CCACCTTGGTCCACGTAACGTGCAGTGTTATTGAAGA 195641
Query 81416 CACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCT 81475
|||| | ||| || || | |||| ||| |||||| ||||| | ||| || ||
Sbjct 195640 CACGGATCATGGGAATCAACCCATTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTG 195581
Query 81476 TGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCAC 81535
||| || | ||| |||| |||||| | ||||||| ||| |||||| ||||
Sbjct 195580 TGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCAC 195521
Query 81536 ACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAAC 81595
|| |||| || || ||||| || |||||| || | |||||| ||| || |||||
Sbjct 195520 ACTCTTTCAAAGTGTCGTAAATACCTTCGATGGAGTCGTCCTTCATGGCAATCAGGAAAC 195461
Query 81596 AGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGA 81655
| ||||| |||||| | | |||||||| || || || |||| |||||| |||
Sbjct 195460 AAGAAGACATTTGAGGGTGTGGCGTACCGGCATTAAATAGAGTGGGGGAAGCGTGAGTGA 195401
Query 81656 AATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGA----ATATCGTCACCG 81711
| || | |||||||| || || || ||| | || ||| || ||| ||||
Sbjct 195400 AGTATCTCAATGACATCAAGTTGTAAGT---CTTCA-GCACGGACTCGATGTCGCTACCG 195345
Query 81712 TGAATACCGATAGCTACACGCAT 81734
|| ||||| | || ||||||||
Sbjct 195344 TGGATACCCAGGGCCACACGCAT 195322
>seq14
Length=538356
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||||||||| ||||| ||||| ||
Sbjct 529688 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCA 529629
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| |||| ||||| |||||||| || ||||| || |||||
Sbjct 529628 GACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGACCAA 529569
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || || | | || | | ||||| ||
Sbjct 529568 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTACAAC 529509
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||| |||||| | || | ||||||
Sbjct 529508 ATCCAAAAGGAGTCCACTTTACACTTGGTCTTG 529476
>seq16
Length=189800
Score = 129 bits (142), Expect = 7e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|||||||| || | || || ||||| || ||| | || ||||| || ||| | |||
Sbjct 50626 TTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 50685
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| |||||||| || || ||||| ||||| || | ||
Sbjct 50686 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAAAGATTA 50745
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || || | | | ||| | | ||||| || ||||||||
Sbjct 50746 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAG 50805
Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618
||||||||| | ||| ||||||||
Sbjct 50806 GAATCCACTTTACATTTAGTCTTG 50829
>seq40
Length=705427
Score = 113 bits (124), Expect = 5e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| || ||||| | || || ||||| || ||||| || ||||| || ||| | |||
Sbjct 667916 CTTCGTTAAGACTTTGACTGGTAAGACCATCACTCTAGAAGTTGAATCTTCTGACACCAT 667857
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
|| ||| | || | || ||||| ||||| || || || || || ||||| || | |
Sbjct 667856 TGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATT 667797
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| ||||||||||||||| | || || | | | ||| | | ||||| || | |||||
Sbjct 667796 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAA 667737
Query 27594 GGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||| | ||| ||||||||
Sbjct 667736 GGAATCCACTTTACATTTAGTCTTG 667712
>seq5
Length=188055
Score = 95.1 bits (104), Expect = 1e-14
Identities = 277/419 (66%), Gaps = 21/419 (5%)
Strand=Plus/Minus
Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-AC----- 81366
|||| ||||| | ||| || || ||||||||||||| ||| | || | | ||
Sbjct 51764 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGT 51705
Query 81367 CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426
| |||| | |||||||||| || ||||||||||| ||| || ||||| | ||||
Sbjct 51704 CTCTTGTTA---CCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAGACACGGATCATA 51648
Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACC 81486
|| || | || | || ||||||||||| | || || || | || || |
Sbjct 51647 GGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATGTAAGAGCCGGTTGCACGAATG 51588
Query 81487 TTGCTGATTGAAAGACCGATGCCACCTGACCACTTT--GAAATCTGAGCACACCGGTTCA 81544
||| || ||||| || ||||| | || ||| |||||| |||||| ||||
Sbjct 51587 TTGTGAATATGTAGACCAATACCACC--AGCAGTTTTGGAAATCAAAGCACATTCCTTCA 51530
Query 81545 TGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACA 81604
|| || || || || || ||| ||| | ||||| ||| | ||||||| ||||
Sbjct 51529 AAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCAACTAGGAAACAGGAGGACA 51470
Query 81605 TCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGT 81664
| ||||| || || || || ||||| | ||||| | |||||| | || || |
Sbjct 51469 TTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAAGTA---TT 51413
Query 81665 TT---GACATCAGGTCATAGGTTTCCTTGA-CGCGTGGAATATCGTCACCGTGAATACC 81719
|| ||||||| || |||||||| || || || ||| | ||||||||||||||
Sbjct 51412 TTAGGGACATCAAGTTATAGGTTT-CTAGAGCGGCCTCAATGTTATCACCGTGAATACC 51355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310043556000
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