Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq19 134 9e-27
seq14 105 4e-18
>seq19
Length=415998
Score = 134 bits (148), Expect = 9e-27
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | | ||||| || |||||| ||| ||||||||||| ||||| ||
Sbjct 67760 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGAT 67819
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| ||||||||||| || || || || | |||||||||||| ||
Sbjct 67820 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 67879
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| || |||||||| |||| || | || ||| || || ||||| || ||
Sbjct 67880 ATACCTTCCTTGTCCTGGATC-TTAGACTTGACGTTATCGATGGTGTCAGAATATTCAAC 67938
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| |||||| || |||||||| | ||||| ||||||||||||||
Sbjct 67939 CTCCAAGGTTATGGTCTTACCGGTCAGAGTTTTGACAAAAATCTGCAT 67986
Score = 104 bits (114), Expect = 1e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| ||||| || | || ||||| || || || ||||||||||||||||| |||||
Sbjct 67531 GCCACCTCTTAGTCTCAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTATAGTCTGA 67590
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| |||| | ||||| |||||||| || ||||| || || | ||||||||| || ||
Sbjct 67591 CAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAAAATCAATCTCTGTTGGTCTGGAGG 67650
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| || |||||||| |||| || | || || | || ||||| || |
Sbjct 67651 AATACCTTCCTTGTCCTGGATC-TTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGA 67709
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | || || || ||||| ||||| ||||| |||||||| |||||
Sbjct 67710 CCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 67758
Score = 102 bits (112), Expect = 5e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | | ||||| || |||||| |||||||||||||| ||||| ||
Sbjct 68216 CCACCTCTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGAC 68275
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| ||||||||||| || || || || | |||||||||||| ||
Sbjct 68276 AGCGTTCTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGA 68335
Query 34600 ACTCCCTCCTTGTC 34613
| || ||||||||
Sbjct 68336 ATGCCTTCCTTGTC 68349
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | | ||||| || || || |||||||||||||| ||||| ||
Sbjct 67988 CCACCTCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGAC 68047
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| | ||||| | |||||||| ||||| || || | ||||||||| || ||
Sbjct 68048 AGCGTTCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGA 68107
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || |||||||| |||| || | || || | || ||||| || ||
Sbjct 68108 ATACCTTCCTTGTCCTGGATC-TTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGAC 68166
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || || ||||| |||| ||||| ||||||||||||||
Sbjct 68167 CTCCAAAGTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 68214
>seq14
Length=538356
Score = 105 bits (116), Expect = 4e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || | |||| ||||||||| ||||| || || ||
Sbjct 529462 CCACCTCTCAATCTCAAGACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 529521
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| ||||||| | ||| ||||| ||||| || || | |||||||| || ||
Sbjct 529522 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 529581
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||||| | || || | ||| |||||| || ||
Sbjct 529582 ATACCTTCCTTGTCTTGAATCTTA-GACTTGACATTGTCAATGGTGTCTGAAGATTCAAC 529640
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||| | ||| || || ||||||||||| || || || ||||| ||||| |||
Sbjct 529641 TTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 529692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729408211650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |