Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq14 93.3 3e-14
seq40 84.2 2e-11
seq16 84.2 2e-11
>seq14
Length=538356
Score = 93.3 bits (102), Expect = 3e-14
Identities = 161/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|| ||||||||||| || || ||| | || || || |||||| |||| || |||
Sbjct 529691 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 529632
Query 27847 ACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
| ||| || ||||| ||||| || || ||||| |||||| |||| |
Sbjct 529631 TCAGACACCATTGACAAT--GTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTG 529574
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | || || ||||| || || |||||||| |||| | | ||||| || |
Sbjct 529573 ACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACT 529514
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||||||| ||| |||||| || ||||| ||| | ||| | || ||
Sbjct 529513 ACAACATCCAAAAGGAGTCCACTTTACACTTGGTCTTGAGATTGAGAGGTGG 529462
>seq40
Length=705427
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
|||||||||||| | || || || ||| | || || ||||| || || ||||||||
Sbjct 667831 GACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAA 667772
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| | | ||||||||| |||||||| ||||| || |||||| ||||| || |||
Sbjct 667771 GACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACATTTAGTCTTG 667712
Query 28003 CGTTTGCGTGGCGG 28016
| ||| | || ||
Sbjct 667711 AGATTGAGAGGTGG 667698
>seq16
Length=189800
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| |||||| | || || || ||| | ||||| ||||| || || ||||||||
Sbjct 50710 GACAAGGAAGGTATCCCTCCTGACCAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAA 50769
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| | | |||||| || |||||||||||||| || |||||| ||||| || |||
Sbjct 50770 GACGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCCACTTTACATTTAGTCTTG 50829
Query 28003 CGTTTGCGTGGCGG 28016
| ||| | || ||
Sbjct 50830 AGATTGAGAGGTGG 50843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355862183146350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |