Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq14 120 7e-22
seq19 116 9e-21
seq16 89.7 1e-12
>seq14
Length=538356
Score = 120 bits (132), Expect = 7e-22
Identities = 154/211 (73%), Gaps = 1/211 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | ||| ||||| |||||||||||||| || | |||||||| || ||||| |
Sbjct 529482 CAAG-TGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCCA 529540
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | || |||||||| |||||||
Sbjct 529541 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGAA 529600
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | | |||||||| || |||||||| |||||||| || |
Sbjct 529601 TCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTAC 529660
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || | |||||| ||||| | ||||| ||
Sbjct 529661 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 529691
>seq19
Length=415998
Score = 116 bits (128), Expect = 9e-21
Identities = 168/236 (71%), Gaps = 1/236 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| || || ||||| | |||||||| ||||||||||| ||||||||||| | || |||
Sbjct 67766 CTTAGCCTTAGGACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCGATAGCGTT 67825
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || ||||| || ||| || ||||| || | |||||| ||||||| | || |||
Sbjct 67826 CTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCT 67885
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || ||||| | || | | |||| ||| || || || |
Sbjct 67886 TCCTTGTCCTGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAG 67945
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
|| || || || || || ||||| || || || | |||||| ||| |||| |||
Sbjct 67946 GTTATGGTCTTACCGGTCAGAGTTTTGACAAAAATCTGCATACCACCTCTTAGTCT 68001
Score = 111 bits (122), Expect = 4e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| || || ||||| | |||||||| || || ||||| ||||||||||| | | |||
Sbjct 68222 CTTAGCCTTAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAGCGTT 68281
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || ||||| || ||| || ||||| || | |||||| ||||||| | || |||
Sbjct 68282 CTACCGTCTTCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATGCCT 68341
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || ||||| ||||| | || | | || ||| || || || | |
Sbjct 68342 TCCTTGTCCTGGATTTTGGACTTGACGTTGTCGATAGTATCAGAAGATTCGACCTCCAAA 68401
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||||||| || || || || ||||| ||||| | |||||
Sbjct 68402 GTAATAGTCTTACCAGTCAGTGTCTTGACGAAAATTTGCAT 68442
Score = 105 bits (116), Expect = 2e-17
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| ||||| ||||| | ||||| ||||| || ||||| ||||||||||| | | |||
Sbjct 67994 CTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCGACAGCGTT 68053
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| |||||||| | ||| || || || || | ||||| ||||| | | || |||
Sbjct 68054 CTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCT 68113
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || || ||| | |||| | |||| ||| || || || | |
Sbjct 68114 TCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGACCTCCAAA 68173
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || || ||||| || || || | ||||||
Sbjct 68174 GTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 68214
>seq16
Length=189800
Score = 89.7 bits (98), Expect = 1e-12
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||| | ||| | ||| || || |||||||||||||| || | || ||||| ||
Sbjct 50832 TCTCAAGACTAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 50773
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||||| | || || || ||||| | || || ||||| | | ||| ||||||||
Sbjct 50772 GTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTT 50713
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
|||||||| ||| |||||| | || | |||| ||| || ||||| | ||| ||
Sbjct 50712 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 50653
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAA 152095
|| || || || | ||| || || ||
Sbjct 50652 GGTCTTACCAGTCAAAGTTTTGACAAA 50626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820060833550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |