Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242645.1_202017-08-07]
50 sequences; 11,623,528 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq40 161 2e-34
seq14 161 2e-34
seq16 158 3e-33
seq19 143 6e-29
>seq40
Length=705427
Score = 161 bits (178), Expect = 2e-34
Identities = 155/196 (79%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954
|||||| ||| ||| ||||| ||||||||||| | |||| || | || || || | ||
Sbjct 667721 ATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-GTTCTACCGTCTTCCAATT 667779
Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014
| || || ||||||||||| | |||||||||| || ||||| || |||||||| ||||
Sbjct 667780 GCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTGTCTTGAATCT 667839
Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074
| | ||| || | || || ||||| |||| ||| ||||| |||||||| |||||||| |
Sbjct 667840 TGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATGGTCTTACCAG 667899
Query 283075 TCAAAGTCTTAACGAA 283090
||||||||||||||||
Sbjct 667900 TCAAAGTCTTAACGAA 667915
>seq14
Length=538356
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| ||| || ||||||||||||||||||| | || | ||| || ||
Sbjct 529480 ACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCC 529539
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||||||||| | |||||||||| |||||||| |||||||||||
Sbjct 529540 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGA 529599
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| |||| ||| ||||| || || || ||||||
Sbjct 529600 ATCTTAGACTTGACATTGTCAATGGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTA 529659
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || |||||||| ||||| || ||||| ||
Sbjct 529660 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 529691
>seq16
Length=189800
Score = 158 bits (174), Expect = 3e-33
Identities = 154/196 (79%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954
|||||| ||| ||| ||||||||||||||||||| |||| || | || || || | ||
Sbjct 50820 ATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATT 50762
Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014
| || || |||||||| || | |||||||||| || ||||| ||||||||||| ||||
Sbjct 50761 GCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCT 50702
Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074
||| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| |
Sbjct 50701 TTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAG 50642
Query 283075 TCAAAGTCTTAACGAA 283090
||||||| || || ||
Sbjct 50641 TCAAAGTTTTGACAAA 50626
>seq19
Length=415998
Score = 143 bits (158), Expect = 6e-29
Identities = 147/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||| ||||| | ||||| | ||||| || ||||||||||| |||||
Sbjct 67567 TTCCTTTTGAATGTTATAGTCTGACAGCGTTCTACCATCTTCCAGTTGTTTCCCTGCAAA 67626
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | |||||||| |||||||| |||||||| |||||||| || || |
Sbjct 67627 AATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCCTGGATCTTACTCTTCACATT 67686
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| |||||| || | |||||| |||||||| || ||||| || ||
Sbjct 67687 GTCTATGGTGTCAGAAGATTCGACCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGAC 67746
Query 283088 GAATATCTGCAT 283099
|| || |||||
Sbjct 67747 AAAAATTTGCAT 67758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738529432700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |