Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq190 100 2e-16 >seq190 Length=622597 Score = 100 bits (110), Expect = 2e-16 Identities = 321/498 (64%), Gaps = 29/498 (6%) Strand=Plus/Plus Query 101684 GCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGC 101743 || |||| ||||| ||| | || ||||| || | |||||| || ||||| || || Sbjct 26951 GCTTCAACATGATCCTTATACACATGCGCATCCCCCAAAGTATGAATGAACTCACCCGGT 27010 Query 101744 ACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAAT 101803 | | || ||| | ||||||||| | || || || | ||| ||||| |||||| Sbjct 27011 TCCATATCGACGACTTTAGCAATCATTCTGGTCAACAGGGCATATGAGGCAATATTAAAT 27070 Query 101804 GGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAG------CTT- 101856 ||||| |||| |||||||||| || | || || | ||| ||||| ||| Sbjct 27071 GGCACACCTAGCCCCATATCACAGGAACGCTGGTATAACAAACATGAAAGGCGAGGCTTA 27130 Query 101857 -----TCCA------TC---------ACAGACATAAAATTGACTTAATACATGACAAGGC 101896 |||| || || ||||||||| || || | ||| || || Sbjct 27131 CCGCTTCCACTTTCCTCTTTGGGGAAACTGACATAAAACTGTGAAAAAATATGGCATGGT 27190 Query 101897 GGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCT 101956 || || |||| || || |||| | ||||||||||| ||| | ||||||||||| Sbjct 27191 GGTAAAGCCATCTTGTCAAAATCTGCAGGATTCCAAGCACTCATGATGATCCTTCTATCG 27250 Query 101957 GTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTA 102016 |||||||||||||| | | || | ||| || | || || | |||| ||| || Sbjct 27251 TAAGGGTTTGTTTTTAATTTGTGTATAACCTGCTTCAGCTGATCGATGCCTTGTCCGGTA 27310 Query 102017 TAATC-GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACAC 102075 || || | | || | || |||| || |||||||| ||||| || || ||||| || Sbjct 27311 TAGTCATCATCGCACGTC-TTGTATTGGGCACCGAAATGTCTCCATTGGAACCCATAAAC 27369 Query 102076 AGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGA 102135 || || || |||||| | | ||| || | |||| ||||| || || | ||| Sbjct 27370 GGGGCCCAGGTCTCCTACTTTTCTATCCGTGAGCCCAATCTTATCCAAGTATTCACGAGA 27429 Query 102136 TCCATTCGCATCCCAAAT 102153 ||||| | ||||| || Sbjct 27430 CCCATTACCGTCCCAGAT 27447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361249231971197