Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq224 104 2e-17 seq257 96.9 3e-15 >seq224 Length=1007144 Score = 104 bits (114), Expect = 2e-17 Identities = 152/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA---TCC 118586 |||||||| | || ||||||||||||||||||||||| |||| | | || || Sbjct 62301 ACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCG--ATAGCGTTC-TACCGTCT 62357 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || || ||||| |||||| | || | | ||| || || ||||| || || |||||||| Sbjct 62358 TCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCC 62417 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 || || || || | |||| |||||| | || ||||| | ||| | || Sbjct 62418 TGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTC 62477 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||||||||||||| |||||||||||||| Sbjct 62478 TTACCGGTCAGAGTTTTGACAAAAATCTGCAT 62509 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | || |||||| || ||||| | || |||||||||||||||||||| || Sbjct 62053 TACCACCTCTTAGTCTCAAGACTAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTG 62112 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| | |||||| || ||||| |||||| | || | | |||||| || || | Sbjct 62113 ACAGAGTTCTTCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTG 62172 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || |||||||| || || || || | || | |||||| | |||| Sbjct 62173 GAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGA 62232 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || || || | |||||| |||||||| ||||| Sbjct 62233 CCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 62281 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | || ||| | |||||||| | ||||| || ||||||||||||||||| Sbjct 62509 TACCACCTCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCG 62568 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | ||| || | |||||| || || | || | | ||| || || |||| Sbjct 62569 ACAGCGTTCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAG 62628 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || |||||||| || || || || | || | |||||| | |||| Sbjct 62629 GAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGA 62688 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || || || |||||||| |||||||||||||| Sbjct 62689 CCTCCAAAGTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 62737 >seq257 Length=84383 Score = 96.9 bits (106), Expect = 3e-15 Identities = 295/449 (66%), Gaps = 13/449 (3%) Strand=Plus/Plus Query 44855 GAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCG 44914 ||| || ||||||| |||||| ||||||| || |||||||| ||| || || | Sbjct 41041 GAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTTTCCGGGTCCTTCGCCTCC 41100 Query 44915 ATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATT 44974 || || | |||| | | || |||||||||| |||| || ||||||| |||| Sbjct 41101 ATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTCTCCAACGAACTGATC 41160 Query 44975 TCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGAGTCGAT 45034 | |||||||||||| |||||||| |||||||||| | | | | | | || Sbjct 41161 TGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGT----TGTTCGCCCACTTGAA 41216 Query 45035 CAA-AAGTTGGACGCGCCCACCGTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGAT 45093 || ||| |||| | ||| |||| | | || || |||| ||||| | ||||| | Sbjct 41217 AAACAAGCCGGACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGA-AC 41275 Query 45094 GGAATTTTTTGCT-GAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGAATATGATGA 45152 | | || || || || |||| | | ||| | || |||||||| | |||||| Sbjct 41276 AAAGATACTTCCTAGACGCCTTGCCAGTCGCCTTGCTAGGTATGAACGCCGACTTGATGA 41335 Query 45153 GAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATGT 45212 | ||| | ||||| ||||| || | ||| | ||| || ||| ||||| || Sbjct 41336 ACCAATACGTCGAGTTCGTCGCAGACAGACTTTTGGTCGCCTT-CGGTA--ACAAGAAGT 41392 Query 45213 ACTATA---CTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAACTA 45269 |||| | || ||||| ||||| || ||| | || ||||| |||| || || || | Sbjct 41393 ACTACAAGGTCGACAACCCCTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGACCA 41452 Query 45270 AtttttttGAGAAACGCGTCGGCGAATAC 45298 | || || || || | ||| ||| ||| Sbjct 41453 ACTTCTTCGAAAAGAGAGTCTCCGACTAC 41481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828036573324