Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq224 104 2e-17
seq257 96.9 3e-15
>seq224
Length=1007144
Score = 104 bits (114), Expect = 2e-17
Identities = 152/212 (72%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA---TCC 118586
|||||||| | || ||||||||||||||||||||||| |||| | | || ||
Sbjct 62301 ACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCCG--ATAGCGTTC-TACCGTCT 62357
Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646
|| || ||||| |||||| | || | | ||| || || ||||| || || ||||||||
Sbjct 62358 TCCAGTTGTTTACCAGCGAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCC 62417
Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706
|| || || || | |||| |||||| | || ||||| | ||| | ||
Sbjct 62418 TGGATCTTAGACTTGACGTTATCGATGGTGTCAGAATATTCAACCTCCAAGGTTATGGTC 62477
Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||||||||||||| ||||||||||||||
Sbjct 62478 TTACCGGTCAGAGTTTTGACAAAAATCTGCAT 62509
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | || |||||| || ||||| | || |||||||||||||||||||| ||
Sbjct 62053 TACCACCTCTTAGTCTCAAGACTAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAGTCTG 62112
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| | |||||| || ||||| |||||| | || | | |||||| || || |
Sbjct 62113 ACAGAGTTCTTCCATCCTCCAGTTGTTTACCAGCGAAAATCAATCTCTGCTGGTCTGGTG 62172
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || |||||||| || || || || | || | |||||| | ||||
Sbjct 62173 GAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGA 62232
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | || || || || | |||||| |||||||| |||||
Sbjct 62233 CCTCTAAAGTGATAGTCTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 62281
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | || ||| | |||||||| | ||||| || |||||||||||||||||
Sbjct 62509 TACCACCTCTTAGTCTTAGGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCCG 62568
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || | ||| || | |||||| || || | || | | ||| || || ||||
Sbjct 62569 ACAGCGTTCTACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGTTGGTCTGGAG 62628
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || |||||||| || || || || | || | |||||| | ||||
Sbjct 62629 GAATACCTTCCTTGTCCTGGATCTTACTCTTCACATTGTCTATGGTGTCAGAAGATTCGA 62688
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | || || || || |||||||| ||||||||||||||
Sbjct 62689 CCTCCAAAGTGATAGTCTTACCAGTTAGAGTTTTGACAAAAATCTGCAT 62737
>seq257
Length=84383
Score = 96.9 bits (106), Expect = 3e-15
Identities = 295/449 (66%), Gaps = 13/449 (3%)
Strand=Plus/Plus
Query 44855 GAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCG 44914
||| || ||||||| |||||| ||||||| || |||||||| ||| || || |
Sbjct 41041 GAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTTTCCGGGTCCTTCGCCTCC 41100
Query 44915 ATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATT 44974
|| || | |||| | | || |||||||||| |||| || ||||||| ||||
Sbjct 41101 ATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTCTCCAACGAACTGATC 41160
Query 44975 TCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGAGTCGAT 45034
| |||||||||||| |||||||| |||||||||| | | | | | | ||
Sbjct 41161 TGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGT----TGTTCGCCCACTTGAA 41216
Query 45035 CAA-AAGTTGGACGCGCCCACCGTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGAT 45093
|| ||| |||| | ||| |||| | | || || |||| ||||| | ||||| |
Sbjct 41217 AAACAAGCCGGACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGA-AC 41275
Query 45094 GGAATTTTTTGCT-GAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGAATATGATGA 45152
| | || || || || |||| | | ||| | || |||||||| | ||||||
Sbjct 41276 AAAGATACTTCCTAGACGCCTTGCCAGTCGCCTTGCTAGGTATGAACGCCGACTTGATGA 41335
Query 45153 GAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATGT 45212
| ||| | ||||| ||||| || | ||| | ||| || ||| ||||| ||
Sbjct 41336 ACCAATACGTCGAGTTCGTCGCAGACAGACTTTTGGTCGCCTT-CGGTA--ACAAGAAGT 41392
Query 45213 ACTATA---CTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAACTA 45269
|||| | || ||||| ||||| || ||| | || ||||| |||| || || || |
Sbjct 41393 ACTACAAGGTCGACAACCCCTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGACCA 41452
Query 45270 AtttttttGAGAAACGCGTCGGCGAATAC 45298
| || || || || | ||| ||| |||
Sbjct 41453 ACTTCTTCGAAAAGAGAGTCTCCGACTAC 41481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433828036573324
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |