Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq257 123 5e-23 seq57 84.2 4e-11 >seq257 Length=84383 Score = 123 bits (136), Expect = 5e-23 Identities = 284/426 (67%), Gaps = 15/426 (4%) Strand=Plus/Plus Query 101936 GAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTATT 101995 ||||| |||||||| || | ||||| ||||| |||||| | ||||| || ||||| Sbjct 41068 GAAGGTGTCTTCTTTTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATG 41127 Query 101996 TTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGAC 102055 |||| ||| | |||| |||||| || | || | || ||||||||| | || |||| Sbjct 41128 ATGCCCGGTTTGACCTTCTCCAACGAACTGATCTGCAGAGACGAAGGTTTGCACACCGAC 41187 Query 102056 TTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAGGATTCTT 102115 ||||| || || |||| | |||| | | | | || || || | Sbjct 41188 TTTGCCTGTTTGTTGTTCGCCCAC-------TTGAAAAACAAGCCGGACCCAGCCATCGT 41240 Query 102116 G----AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCC 102171 |||| ||||| || |||||| || |||||| || || || || |||| Sbjct 41241 CGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACAAAGATACTTCCTAGACGCCTTGCC 41300 Query 102172 TGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGA 102231 || || | || |||||| | | ||||||| ||| ||| | || || || ||||| Sbjct 41301 AGTCGCCTTGCTAGGTATGAACGCCGACTTGATGAACCAATACGTCGAGTTCGTCGCAGA 41360 Query 102232 TAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCA 102289 | ||| ||||| | | || || |||| | |||| || || |||||||||| Sbjct 41361 CAGACTTTTGGTCGCCTTCGGTAACAAGAA--GTACTACAAGGTCGACAACCCCTTCGAT 41418 Query 102290 TTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAG 102349 |||||||| || |||||| | | |||||||||||| || |||||||||||| |||| Sbjct 41419 TTCATGGAAAACATTTCCTTGGCCGGTAAGACCAACTTCTTCGAAAAGAGAGTCTCCGAC 41478 Query 102350 TATCAA 102355 || ||| Sbjct 41479 TACCAA 41484 >seq57 Length=156688 Score = 84.2 bits (92), Expect = 4e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || || ||||||||||| || || || ||| || | ||| || |||||||| |||||| Sbjct 58484 CCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATG 58425 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACA 94910 || || | | | | | ||||| || || || | ||| || |||| | || || Sbjct 58424 GAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGC-GTACCGGC 58366 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 |||||| |||||||||||||| ||||| || || | |||||| | | || || | Sbjct 58365 ATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTT 58306 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCAT 95018 | || || | ||| || |||||||| || | ||||||||||| Sbjct 58305 CAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCAT 58258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989578332466885