Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq35 170 2e-37
seq57 118 1e-21
>seq35
Length=195003
Score = 170 bits (188), Expect = 2e-37
Identities = 520/791 (66%), Gaps = 21/791 (3%)
Strand=Plus/Minus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
|||| || |||| |||| | || || | || |||||||| ||||||||| || ||
Sbjct 52047 TCAATGGTAAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAATACATACCGGTC 51988
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
||||| || |||| ||||| ||||||||||| || || || | || || |
Sbjct 51987 TTTAGACCTTTCTTCCAACCGTAGAAATGCATACTTGTTAGCTTACCCATGGTTGGGGCA 51928
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCA 36967
| ||| ||| || || |||||| || ||||| | | |||||||||||
Sbjct 51927 CGCAAGAATAAATTCAAAGAATGGGATTGATCGATGTAAACGG--CACGGTCGGCTGCCA 51870
Query 36968 TTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027
| | | ||| ||||| || || |||||||| || ||||| | | ||| | | |
Sbjct 51869 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTATACAAATCTTTCAATTCTT 51810
Query 37028 CTGGTAAATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATT-CTTTATG 37083
||||| | | ||| |||||| |||||||| ||| | | |||| ||| ||
Sbjct 51809 GTGGTACGTTTGGTAAACCTTGAATGGAACCATTTTGTGTGATTAGA-TATTGCTTCATA 51751
Query 37084 TCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143
||| || ||| ||| | | | || | || || || |||||| || || |||
Sbjct 51750 CCATCATCCCAAATACCCAAATCAACCAAATCACGCAGTAAGTATGGATTGACGACTTGA 51691
Query 37144 AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCA 37203
|| || ||||||| || | | | || || ||| |||| |||||| | ||||
Sbjct 51690 AATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACTGGTTCGAAACACTCG 51631
Query 37204 TTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTAT 37261
|| | || ||| || || || || |||||||||||||| ||||| || | ||| |
Sbjct 51630 TTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCCATGGTCAAAGAGT-- 51573
Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTT---AGTTCATTCCAATCCCATAAATCTG 37318
|||| | ||||| | | || || ||| | ||| || ||||||||| | | | |
Sbjct 51572 TTCTAACACCATGCTTCATGATG-TCATTTCTCAAAGT--ATCCCAATCCCACATACC-G 51517
Query 37319 TTGGGTTCTTTAACC-ACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTA 37377
| |||| || || |||| || |||| || ||||||| | |||||||| | |
Sbjct 51516 TAAGGTTTTTCGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGG 51457
Query 37378 TATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAA 37437
| || || || || || | ||| |||||| || ||| | ||| | | ||||
Sbjct 51456 AAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGG 51397
Query 37438 TATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAG 37497
|| || ||||| || ||||||||||||| || |||||||||| ||||||| |
Sbjct 51396 TACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAGTCGAATGGTAAA 51337
Query 37498 CCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTC 37557
| ||| || || || ||||||||||| || ||||| | | | || || || ||| ||
Sbjct 51336 CGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTC 51277
Query 37558 TTATTAGATCT 37568
||||||||||
Sbjct 51276 ATATTAGATCT 51266
Score = 168 bits (186), Expect = 6e-37
Identities = 414/625 (66%), Gaps = 2/625 (0%)
Strand=Plus/Minus
Query 38010 TTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGT 38069
|| ||| || || | ||| || | ||| || ||||||| || | ||||||||| | |
Sbjct 50809 TTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGC 50750
Query 38070 TCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTG 38129
| |||||| || || ||||||||| | | | || ||||| |||||||||||
Sbjct 50749 ACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTG 50690
Query 38130 CCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATA 38189
|||||| || | ||| | | | || || ||||| || | ||| ||||| | || |||
Sbjct 50689 CCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATA 50630
Query 38190 TCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTAT 38249
| | ||||| || | | | | |||||| | || || ||||| | ||||| |
Sbjct 50629 ACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGT 50570
Query 38250 ACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGC 38309
||| | || |||| || | || || || || || | || || ||||| ||
Sbjct 50569 ACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGC 50510
Query 38310 ATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATC 38369
| ||| || || ||||| |||| || || || || | |||||||| || |||||
Sbjct 50509 AGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATC 50450
Query 38370 CTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAA 38429
||| |||| | || ||||| |||||||||||| ||| || || ||||| |||||
Sbjct 50449 CTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAA 50390
Query 38430 TGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATC 38489
|| ||||| || || | || ||||| |||| | ||||| ||||||| | |
Sbjct 50389 AGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGC 50330
Query 38490 ATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549
|| || | | | ||||||||||||| | || ||||| | | |||||||| | |||
Sbjct 50329 CTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTC 50270
Query 38550 TATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATA 38609
| || | || | | | || ||||| |||||| ||||| | || || ||
Sbjct 50269 AGCAACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTA 50210
Query 38610 ACTATA-TGAATAATCTCTATCGTA 38633
||| || |||| ||||||| || ||
Sbjct 50209 ACTGTACTGAA-AATCTCTGTCATA 50186
>seq57
Length=156688
Score = 118 bits (130), Expect = 1e-21
Identities = 1108/1779 (62%), Gaps = 68/1779 (4%)
Strand=Plus/Minus
Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873
|| || | || |||||||| || ||||| || || || | ||| |||| |||||
Sbjct 59990 GAAGCGGCTTGTGTTCTCAAGTAGTACATACCCGTCTTCAAACCCTTCTTCCAACCGTAG 59931
Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATC-TATATATATTGTCATTGATTG 36932
||||||||||| || | |||| | || | | | || || | | ||| || ||
Sbjct 59930 AAATGCATACTTGTAA-TTTTACCCATTGATGGTGATTGTAGGAACAAATTCAAGGAGTG 59872
Query 36933 ACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGAT 36990
|||||| || ||| | | | | | || ||||| | | |||| ||||||||
Sbjct 59871 GGATTGATCAATGTAAATGGAACGAT--CAGCAGCCATGTTGATAATAGTCTTTTGAGAG 59814
Query 36991 ATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGA 37047
|| ||||| || |||||||||| | ||| | || | || | | | |||| || |
Sbjct 59813 ATTTCCCAGACAGTTTTATATAGATCTTTCAAATCTTGAGGAACGTTTGGTAAATCTTTA 59754
Query 37048 ATAGAACCATTATG--TAA-CACA-ATTGTATTCTTTATGTCATTATTCCACATATTTCT 37103
|| || ||||| || ||| || | ||||| ||| | | |||| | || || |
Sbjct 59753 ATGGAGCCATTTTGAGTAATCAAATATTGT-TTCATACTATCAT-----CCCAAATGCCC 59700
Query 37104 ACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACT 37161
| | | || || | | || || |||||| || || || || || |||||||| ||
Sbjct 59699 AGATCGACTAAATCACGTAGTAAGTATGGATTGACGACTTGGAATTCACCAGATAAGACA 59640
Query 37162 CTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGA 37221
| | | || || || ||| |||||| | ||||||| | | | |||||
Sbjct 59639 CGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACACTCATTGTACCCAAGAATTTGG 59580
Query 37222 GATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTATTTCTCAATCCATGTGTAT 37279
||||| || || || |||||||| || || | ||| | |||| || |||||| |
Sbjct 59579 GATGTTGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAGT--TTCTTAACCCATGTTTCA 59522
Query 37280 TAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTT--CTTTAACCACAT 37337
||| ||| || | | ||||||||| | | ||| || | || ||||||
Sbjct 59521 CAATGTCCTTCTTCAAAGTGTCCCAATCCCACATGCCAAATGGCTTAGCATT--CCACAT 59464
Query 37338 ATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTA 37397
|| | |||| |||||| ||| || ||||| | | | | || ||| || |
Sbjct 59463 GTCGAACTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAATATTTACCTTC 59404
Query 37398 AATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTG 37457
||| ||||| || ||| || ||| || | |||| || || ||||||||||||||
Sbjct 59403 CTTTTGAGCTAACTCACAAGAAGCTTCAAGGGTAGCATGGTAAATAGTTTCGAAAATTTG 59344
Query 37458 TATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA--ATAATATAAACACA 37515
| |||| | ||||| |||| ||| | || |||| | | || || |||||| |
Sbjct 59343 TTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCAGCATCATATAAGTA-- 59286
Query 37516 TCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA---TCTAGAC 37572
|| |||||||| ||||| || | | || |||||||||||| | ||||| ||||| |
Sbjct 59285 TCGGCCAAACCTTGAACCCCCAGGGCAATAGGTCTATGTTTCATGTTAGAGTTTCTAGCC 59226
Query 37573 GATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATT 37632
||| |||||||||||| || || || | | |||| | || | | | | |
Sbjct 59225 ---TCTGGCACTGGATAATAGTTACGGTCGATGACTCTATTCAAGTTATGAGTGATGACT 59169
Query 37633 TTCGTAAT-TATTCTCAACTTGTCGAACAT-AAATACGTTATTATTAACAAATT-----T 37685
|| | ||| | | | ||||| | ||| | | || || ||| || ||
Sbjct 59168 TTAGCAATGTCATGTAAACTT-TGGAAATTGTAGGTCGCCGTT-TTACCATCTTCCGAAG 59111
Query 37686 ACTCAACGA-------------AATAGATCCTAGATTACATACAGCAACTTCATCTTCGT 37732
|||||||| ||| || ||| |||||| |||||| ||||||| |
Sbjct 59110 TCTCAACGAATGCTGGTAGAGCAATGGAAGCTAAATTACAAACAGCAGTTTCATCTGGGG 59051
Query 37733 TACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTT 37792
| | | | | || || ||| | || |||| | || || |||| || ||
Sbjct 59050 AAGAATACTCGACGATTTCGCAACACAAGTTTGACGATTTGATGGTACCCAGGTTCTGTT 58991
Query 37793 GATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTT 37852
| |||| ||| | ||||| | ||| ||||| | || | || || || |||| |||
Sbjct 58990 GGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTTCTGTTT 58931
Query 37853 GAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTA--Attttttt 37910
| || | | || | | ||||| || || || ||| | |||| | ||
Sbjct 58930 GTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTT---GATGGTTTTACCACGACCTT 58874
Query 37911 CTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCC 37970
| | ||||||| |||||| | | || || | ||||| || ||| || ||
Sbjct 58873 C--TCTTTCGTAACGGGTATATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACC 58816
Query 37971 TGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAA 38030
||| | | ||| | | || | ||| | |||| | ||| || || | ||| ||
Sbjct 58815 TGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAA 58756
Query 38031 TAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTAC 38090
| ||| || | ||||| |||| || |||||| | | | | |||||| || ||
Sbjct 58755 AAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATG 58696
Query 38091 ATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGA 38150
| ||||||| | | ||| ||||| || || || |||||||| || | ||| |
Sbjct 58695 AGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGC 58636
Query 38151 CATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATAT 38210
| || || ||||| || | ||| || || | | || | | ||||| || | |
Sbjct 58635 AAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGAC 58576
Query 38211 TCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTT 38270
| | ||| || | | || || || | ||||| |||| | ||||||| || |
Sbjct 58575 ACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGT 58516
Query 38271 AGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCA 38330
| || ||||| | || | || | ||||||||| || || || | || ||
Sbjct 58515 GGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACA 58456
Query 38331 TTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACA 38390
| ||| || || || | |||||||| || ||| ||||| || | | | |||||
Sbjct 58455 CTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACA 58396
Query 38391 ACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAA 38450
| |||||||||||| ||| || ||||| ||||||| ||| || || || || ||||
Sbjct 58395 AGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAA 58336
Query 38451 CCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAAT 38510
|| | ||||| | || || || | | || || ||||| | |||||||||
Sbjct 58335 GTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAAT 58276
Query 38511 ACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549
|||||| | || | ||| | || |||||| || | |||
Sbjct 58275 ACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTTC 58237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468522182117680
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