Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq35 170 2e-37 seq57 118 1e-21 >seq35 Length=195003 Score = 170 bits (188), Expect = 2e-37 Identities = 520/791 (66%), Gaps = 21/791 (3%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 |||| || |||| |||| | || || | || |||||||| ||||||||| || || Sbjct 52047 TCAATGGTAAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAATACATACCGGTC 51988 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 ||||| || |||| ||||| ||||||||||| || || || | || || | Sbjct 51987 TTTAGACCTTTCTTCCAACCGTAGAAATGCATACTTGTTAGCTTACCCATGGTTGGGGCA 51928 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCA 36967 | ||| ||| || || |||||| || ||||| | | ||||||||||| Sbjct 51927 CGCAAGAATAAATTCAAAGAATGGGATTGATCGATGTAAACGG--CACGGTCGGCTGCCA 51870 Query 36968 TTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTAT 37027 | | | ||| ||||| || || |||||||| || ||||| | | ||| | | | Sbjct 51869 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTATACAAATCTTTCAATTCTT 51810 Query 37028 CTGGTAAATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATT-CTTTATG 37083 ||||| | | ||| |||||| |||||||| ||| | | |||| ||| || Sbjct 51809 GTGGTACGTTTGGTAAACCTTGAATGGAACCATTTTGTGTGATTAGA-TATTGCTTCATA 51751 Query 37084 TCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143 ||| || ||| ||| | | | || | || || || |||||| || || ||| Sbjct 51750 CCATCATCCCAAATACCCAAATCAACCAAATCACGCAGTAAGTATGGATTGACGACTTGA 51691 Query 37144 AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCA 37203 || || ||||||| || | | | || || ||| |||| |||||| | |||| Sbjct 51690 AATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACTGGTTCGAAACACTCG 51631 Query 37204 TTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTAT 37261 || | || ||| || || || || |||||||||||||| ||||| || | ||| | Sbjct 51630 TTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCCATGGTCAAAGAGT-- 51573 Query 37262 TTCTCAATCCATGTGTATTAATTCTCTTTTTT---AGTTCATTCCAATCCCATAAATCTG 37318 |||| | ||||| | | || || ||| | ||| || ||||||||| | | | | Sbjct 51572 TTCTAACACCATGCTTCATGATG-TCATTTCTCAAAGT--ATCCCAATCCCACATACC-G 51517 Query 37319 TTGGGTTCTTTAACC-ACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTA 37377 | |||| || || |||| || |||| || ||||||| | |||||||| | | Sbjct 51516 TAAGGTTTTTCGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGG 51457 Query 37378 TATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAA 37437 | || || || || || | ||| |||||| || ||| | ||| | | |||| Sbjct 51456 AAGGTTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGG 51397 Query 37438 TATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAG 37497 || || ||||| || ||||||||||||| || |||||||||| ||||||| | Sbjct 51396 TACATGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAGTCGAATGGTAAA 51337 Query 37498 CCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTC 37557 | ||| || || || ||||||||||| || ||||| | | | || || || ||| || Sbjct 51336 CGCAACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTC 51277 Query 37558 TTATTAGATCT 37568 |||||||||| Sbjct 51276 ATATTAGATCT 51266 Score = 168 bits (186), Expect = 6e-37 Identities = 414/625 (66%), Gaps = 2/625 (0%) Strand=Plus/Minus Query 38010 TTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGT 38069 || ||| || || | ||| || | ||| || ||||||| || | ||||||||| | | Sbjct 50809 TTCTTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGC 50750 Query 38070 TCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTG 38129 | |||||| || || ||||||||| | | | || ||||| ||||||||||| Sbjct 50749 ACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTG 50690 Query 38130 CCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATA 38189 |||||| || | ||| | | | || || ||||| || | ||| ||||| | || ||| Sbjct 50689 CCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATA 50630 Query 38190 TCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTAT 38249 | | ||||| || | | | | |||||| | || || ||||| | ||||| | Sbjct 50629 ACGGGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGT 50570 Query 38250 ACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGC 38309 ||| | || |||| || | || || || || || | || || ||||| || Sbjct 50569 ACCAGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGC 50510 Query 38310 ATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATC 38369 | ||| || || ||||| |||| || || || || | |||||||| || ||||| Sbjct 50509 AGTTTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATC 50450 Query 38370 CTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAA 38429 ||| |||| | || ||||| |||||||||||| ||| || || ||||| ||||| Sbjct 50449 CTTCATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAA 50390 Query 38430 TGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATC 38489 || ||||| || || | || ||||| |||| | ||||| ||||||| | | Sbjct 50389 AGTTGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGC 50330 Query 38490 ATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 || || | | | ||||||||||||| | || ||||| | | |||||||| | ||| Sbjct 50329 CTCAATGTTATCACCGTGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTC 50270 Query 38550 TATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATA 38609 | || | || | | | || ||||| |||||| ||||| | || || || Sbjct 50269 AGCAACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTA 50210 Query 38610 ACTATA-TGAATAATCTCTATCGTA 38633 ||| || |||| ||||||| || || Sbjct 50209 ACTGTACTGAA-AATCTCTGTCATA 50186 >seq57 Length=156688 Score = 118 bits (130), Expect = 1e-21 Identities = 1108/1779 (62%), Gaps = 68/1779 (4%) Strand=Plus/Minus Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873 || || | || |||||||| || ||||| || || || | ||| |||| ||||| Sbjct 59990 GAAGCGGCTTGTGTTCTCAAGTAGTACATACCCGTCTTCAAACCCTTCTTCCAACCGTAG 59931 Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATC-TATATATATTGTCATTGATTG 36932 ||||||||||| || | |||| | || | | | || || | | ||| || || Sbjct 59930 AAATGCATACTTGTAA-TTTTACCCATTGATGGTGATTGTAGGAACAAATTCAAGGAGTG 59872 Query 36933 ACTTTGATCTAT--AAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGAT 36990 |||||| || ||| | | | | | || ||||| | | |||| |||||||| Sbjct 59871 GGATTGATCAATGTAAATGGAACGAT--CAGCAGCCATGTTGATAATAGTCTTTTGAGAG 59814 Query 36991 ATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGA 37047 || ||||| || |||||||||| | ||| | || | || | | | |||| || | Sbjct 59813 ATTTCCCAGACAGTTTTATATAGATCTTTCAAATCTTGAGGAACGTTTGGTAAATCTTTA 59754 Query 37048 ATAGAACCATTATG--TAA-CACA-ATTGTATTCTTTATGTCATTATTCCACATATTTCT 37103 || || ||||| || ||| || | ||||| ||| | | |||| | || || | Sbjct 59753 ATGGAGCCATTTTGAGTAATCAAATATTGT-TTCATACTATCAT-----CCCAAATGCCC 59700 Query 37104 ACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACT 37161 | | | || || | | || || |||||| || || || || || |||||||| || Sbjct 59699 AGATCGACTAAATCACGTAGTAAGTATGGATTGACGACTTGGAATTCACCAGATAAGACA 59640 Query 37162 CTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGA 37221 | | | || || || ||| |||||| | ||||||| | | | ||||| Sbjct 59639 CGACGAGAGTACATGTTTGAAGTGACTGGTTCGAAACACTCATTGTACCCAAGAATTTGG 59580 Query 37222 GATGTAGATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTATTTCTCAATCCATGTGTAT 37279 ||||| || || || |||||||| || || | ||| | |||| || |||||| | Sbjct 59579 GATGTTGAAGCGGTTGGCATTGGGGCCATGGTTAAAGAGT--TTCTTAACCCATGTTTCA 59522 Query 37280 TAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTT--CTTTAACCACAT 37337 ||| ||| || | | ||||||||| | | ||| || | || |||||| Sbjct 59521 CAATGTCCTTCTTCAAAGTGTCCCAATCCCACATGCCAAATGGCTTAGCATT--CCACAT 59464 Query 37338 ATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTA 37397 || | |||| |||||| ||| || ||||| | | | | || ||| || | Sbjct 59463 GTCGAACTGTAAAATACCCTTAGAGGCAGGAGAGCCTTCAAAAGTGGAATATTTACCTTC 59404 Query 37398 AATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTG 37457 ||| ||||| || ||| || ||| || | |||| || || |||||||||||||| Sbjct 59403 CTTTTGAGCTAACTCACAAGAAGCTTCAAGGGTAGCATGGTAAATAGTTTCGAAAATTTG 59344 Query 37458 TATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA--ATAATATAAACACA 37515 | |||| | ||||| |||| ||| | || |||| | | || || |||||| | Sbjct 59343 TTTATTAAGTATTTGAGCTTTTTCACATTCAAATGGTAAACGCAGCATCATATAAGTA-- 59286 Query 37516 TCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA---TCTAGAC 37572 || |||||||| ||||| || | | || |||||||||||| | ||||| ||||| | Sbjct 59285 TCGGCCAAACCTTGAACCCCCAGGGCAATAGGTCTATGTTTCATGTTAGAGTTTCTAGCC 59226 Query 37573 GATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATT 37632 ||| |||||||||||| || || || | | |||| | || | | | | | Sbjct 59225 ---TCTGGCACTGGATAATAGTTACGGTCGATGACTCTATTCAAGTTATGAGTGATGACT 59169 Query 37633 TTCGTAAT-TATTCTCAACTTGTCGAACAT-AAATACGTTATTATTAACAAATT-----T 37685 || | ||| | | | ||||| | ||| | | || || ||| || || Sbjct 59168 TTAGCAATGTCATGTAAACTT-TGGAAATTGTAGGTCGCCGTT-TTACCATCTTCCGAAG 59111 Query 37686 ACTCAACGA-------------AATAGATCCTAGATTACATACAGCAACTTCATCTTCGT 37732 |||||||| ||| || ||| |||||| |||||| ||||||| | Sbjct 59110 TCTCAACGAATGCTGGTAGAGCAATGGAAGCTAAATTACAAACAGCAGTTTCATCTGGGG 59051 Query 37733 TACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTT 37792 | | | | | || || ||| | || |||| | || || |||| || || Sbjct 59050 AAGAATACTCGACGATTTCGCAACACAAGTTTGACGATTTGATGGTACCCAGGTTCTGTT 58991 Query 37793 GATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTT 37852 | |||| ||| | ||||| | ||| ||||| | || | || || || |||| ||| Sbjct 58990 GGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTTCTGTTT 58931 Query 37853 GAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTA--Attttttt 37910 | || | | || | | ||||| || || || ||| | |||| | || Sbjct 58930 GTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTT---GATGGTTTTACCACGACCTT 58874 Query 37911 CTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCC 37970 | | ||||||| |||||| | | || || | ||||| || ||| || || Sbjct 58873 C--TCTTTCGTAACGGGTATATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACC 58816 Query 37971 TGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAA 38030 ||| | | ||| | | || | ||| | |||| | ||| || || | ||| || Sbjct 58815 TGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAA 58756 Query 38031 TAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTAC 38090 | ||| || | ||||| |||| || |||||| | | | | |||||| || || Sbjct 58755 AAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATG 58696 Query 38091 ATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGA 38150 | ||||||| | | ||| ||||| || || || |||||||| || | ||| | Sbjct 58695 AGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGC 58636 Query 38151 CATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATAT 38210 | || || ||||| || | ||| || || | | || | | ||||| || | | Sbjct 58635 AAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGAC 58576 Query 38211 TCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTT 38270 | | ||| || | | || || || | ||||| |||| | ||||||| || | Sbjct 58575 ACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGT 58516 Query 38271 AGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCA 38330 | || ||||| | || | || | ||||||||| || || || | || || Sbjct 58515 GGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACA 58456 Query 38331 TTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACA 38390 | ||| || || || | |||||||| || ||| ||||| || | | | ||||| Sbjct 58455 CTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACA 58396 Query 38391 ACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAA 38450 | |||||||||||| ||| || ||||| ||||||| ||| || || || || |||| Sbjct 58395 AGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAA 58336 Query 38451 CCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAAT 38510 || | ||||| | || || || | | || || ||||| | ||||||||| Sbjct 58335 GTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAAT 58276 Query 38511 ACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 |||||| | || | ||| | || |||||| || | ||| Sbjct 58275 ACCTAGGGCCACACGCATGACCAAATGTTGGGGACGTTC 58237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468522182117680