Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07] 447 sequences; 12,513,392 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq35 300 2e-76 seq57 217 2e-51 >seq35 Length=195003 Score = 300 bits (332), Expect = 2e-76 Identities = 1331/2078 (64%), Gaps = 57/2078 (3%) Strand=Plus/Minus Query 64835 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893 ||||| | |||||||| | ||| || |||| || || | | ||| ||||| || || | Sbjct 52046 CAATGGTAAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAATACATACCGGTCT 51987 Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCT 64952 ||||||| |||| ||||| ||||||||||| ||||| || || | || Sbjct 51986 TTAGACCTTTCTTCCAACCGTAGAAATGCATACTTGTTAGCTTACCCATGGTTGGGGCAC 51927 Query 64953 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 65012 || | | | ||||| ||| || |||||||||| | | | | ||| || ||||| Sbjct 51926 GCAAGAATAA-ATTCAAAGAATGGGATTGATCGATGTAAACGGCACGGTCGGCTGCCATG 51868 Query 65013 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTC 65071 || ||||| |||||||||| ||||||||||| ||| ||||| || || | ||| |||| Sbjct 51867 TTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTATACAAATCTTTCAAT-TCTTG 51809 Query 65072 TGGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATT-CTTGATCT 65127 ||| | ||||| || | |||||||| ||| | || || | |||| ||| || Sbjct 51808 TGGTACGTTTGGTAAACCTTGAATGGAACCATTTTGTGTGATTAGA-TATTGCTTCATAC 51750 Query 65128 CATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186 |||||| ||| ||| | || ||| | | || | | ||||| || |||||| Sbjct 51749 CATCATCCCA-AATACCCAAATCAACCAAATCACGCAGTAAGTATGGATTGACGACTTGA 51691 Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246 ||||| ||||| | || | |||| ||| || || ||| ||||| | | |||| Sbjct 51690 AATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACTGGTTCGAAACACTCG 51631 Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306 || | || ||||| || | ||| |||||||| ||||||||||||| ||| ||| Sbjct 51630 TTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCCATGGTCAAAGAGTTT 51571 Query 65307 CTAAGACCGTATG-TTC-TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 65364 |||| ||| ||| ||| |||| | || | | | || ||||||| ||| | | | | | Sbjct 51570 CTAACACC--ATGCTTCATGATGTCATTTCTCAAAGTATCCCAATCCCACATACCGTAAG 51513 Query 65365 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 65424 || | ||| || ||||| | | || || ||| | | Sbjct 51512 GTTTTTCGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGGAAGG 51453 Query 65425 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 65484 | |||||||| || || | | |||||| |||||| || || | | | | | || | Sbjct 51452 TTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGGTACA 51393 Query 65485 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 65544 ||||||| ||||| | ||||||| ||||||| | || ||||| || | Sbjct 51392 TGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAGTCGAATGGTAAACGCA 51333 Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604 | | || || | ||| || || ||||| ||||| | | | || || || |||||| ||| Sbjct 51332 ACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTCATAT 51273 Query 65605 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 65664 |||| || ||||| | ||||||||| ||| || |||| || || | || | Sbjct 51272 TAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAATAACGTTGTTTAAGTTAC 51213 Query 65665 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC----------GC--- 65711 || ||||| | || | || || || | | || || Sbjct 51212 GAGTGATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATATGTAGAAGTTTTGCCGT 51153 Query 65712 --TCATCTATTACAA-ACATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCT 65766 ||| | || ||| | ||| | ||| |||||||| |||| |||||||| || || Sbjct 51152 CTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAGCAGTCT 51093 Query 65767 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 65826 ||| | | | | |||| | || ||| ||| | ||| ||||||| || | Sbjct 51092 CATCTGGAGCGGAGTATTCAACAATTTCACAGCACAAGTTAGACGACTTGATAACACCCA 51033 Query 65827 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 65886 | || | ||| || || ||||||| |||||||| |||| || || || ||||||| Sbjct 51032 AGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAACAACAAAGGGTGTACCAG 50973 Query 65887 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT 65946 |||| | || | ||| | || | | ||| | | | ||||| || || || Sbjct 50972 TTTCCGTTTGTGCTTCCAATATAGAGTACCACAATTTTTGGGCCTTGAT---AGTCTTAC 50916 Query 65947 ATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 66006 | |||| ||||||| | ||||| | ||| || ||||| || | || | Sbjct 50915 CACGGCCTTCTTTTTCGTAACGGGTATATAGGGCTTCAAATTCGTCACCGTAG-CAGTCA 50857 Query 66007 CC-AATCCAGGAC---ATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 66062 | || || ||| || | ||| | | || | ||| |||| || | || Sbjct 50856 CTTAAGCCTGGAGCCGATGTA---GGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACA 50800 Query 66063 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCC 66122 || ||||| || ||||| |||| ||| |||||| ||||||||||| | | ||| Sbjct 50799 CGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACGGATTTCT 50740 Query 66123 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCC 66182 || || || ||||||| ||| |||| ||| | | |||||| ||||| || ||| Sbjct 50739 TCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCC 50680 Query 66183 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 66242 || |||| || | | ||||| | ||||| || ||||| || | || | || ||| Sbjct 50679 AAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATAACGGGCAGTG 50620 Query 66243 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 66302 || || | || | | ||| ||||| | || || || || || || || || | || Sbjct 50619 TTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATG 50560 Query 66303 TAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 66362 || || |||||||||| || ||| |||||| || || || || |||| || Sbjct 50559 TAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAA 50500 Query 66363 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 66422 || || || ||| || || || || ||||| || || || ||||||| |||| | Sbjct 50499 ATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCA 50440 Query 66423 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 66482 | ||| |||||| |||||||| | || || || || ||||| || ||||| Sbjct 50439 ACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAG 50380 Query 66483 GCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATC 66541 ||||| ||||| ||||| || | | || || || || | ||| | || || | Sbjct 50379 GCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTA 50320 Query 66542 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 66601 || | ||||| |||| ||||| | ||| | | ||| || || | |||| | | ||| Sbjct 50319 TCACCG-TGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC-AACTT 50262 Query 66602 G-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-T 66659 | ||| | | |||| ||||| || ||| |||||||||||||| || || |||| | Sbjct 50261 GACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAACTGTACT 50202 Query 66660 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA 66719 ||||| |||| || || | |||| | ||||| ||||||||||| | || | || | | Sbjct 50201 GAAAA-TCTCTGTCATAGACAATAGCTGAGTTTAGTTTATCCTTGTTTTCCATGACAATA 50143 Query 66720 TCCATGGTAATA-CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAG 66776 | || || | | | ||||| || |||| ||| ||| | ||| ||||| || Sbjct 50142 T---TGTAAACATCGTCAGAAATCATAGGAGCGGCTTTACCAGTAGCAGGGTTGACGTAT 50086 Query 66777 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGAT 66836 | | | |||||| | |||| | ||| |||| | |||| ||| |||| ||| || Sbjct 50085 CTATAAAGATCCTCAACAACTTTAGAAAACTGTTTCGTGGTTTGTTTATGTAAATTAGAA 50026 Query 66837 ACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874 | ||| |||||||| || | | | || ||||| || || Sbjct 50025 ATGGCGATTCTAGCAGCCAAAGTAGCGTAATCTGGGTG 49988 >seq57 Length=156688 Score = 217 bits (240), Expect = 2e-51 Identities = 736/1135 (65%), Gaps = 25/1135 (2%) Strand=Plus/Minus Query 65814 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 65873 |||||||| || | || ||||| || ||||| ||||||| ||||||||||||| ||| Sbjct 59012 TTGATGGTACCCAGGTTCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATG 58953 Query 65874 AATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 65933 || || ||||| ||||| | || | || | || || | ||| || | ||||||| Sbjct 58952 AAGGGTGTACCGGTTTCTGTTTGTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTTG 58893 Query 65934 ATTATAGATTTGTATCTC--TTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGT 65991 || | ||| || | | |||||||||||| | ||||| | |||||| || | Sbjct 58892 AT----GGTTT-TACCACGACCTTCTCTTTCGTAACGGGTATATAGCTCTTCGAATTCTT 58838 Query 65992 CTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 66051 | |||||||| | |||||| || || || || | | || | ||| | || | Sbjct 58837 CACCCCAAACGTCGTCCAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCAT 58778 Query 66052 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGG 66111 | || | || || ||||| || ||||| |||||||| ||||| || |||||||| | Sbjct 58777 CCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTG 58718 Query 66112 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAAT 66171 | | ||| || || || | ||||| | | ||||| || | | || || || Sbjct 58717 CACGAATTTCTTCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCAT 58658 Query 66172 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 66231 |||| || |||||| | | ||| | | || || | ||||| || || || || | || Sbjct 58657 GCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGT 58598 Query 66232 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGG 66291 | | || ||||| || | || | | ||| ||||| | || || || ||||| |||| Sbjct 58597 AACGTGCAGTGTTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGG 58538 Query 66292 TCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAAT-TGATAGACCTATTCCCCCT 66350 | || | ||||| || | | ||||||||| | || ||| ||||| | || ||| Sbjct 58537 TACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGA-AGACCAACACCACCT 58479 Query 66351 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 66410 || | || || || | || || ||| || || || || || || || || || Sbjct 58478 GCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCG 58419 Query 66411 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 66470 ||| ||||| || || ||||| ||||||||| || | || || ||||||||| Sbjct 58418 TCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAAT 58359 Query 66471 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 66530 | || || |||||||| || || || | || | | ||||| |||| | | Sbjct 58358 AGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACG 58299 Query 66531 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 66590 || || ||||| | ||||| |||| || |||||||| | || || || || | | Sbjct 58298 GACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGT 58239 Query 66591 TCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 66650 || | | | || || | | | || |||||| ||||| ||| ||||| |||||| Sbjct 58238 TCGGCCACTTCACCGTCTAGTCTTAGCAGGTAGGAACGTTCCAGAGTCTTAAACCCAAAA 58179 Query 66651 TAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 66708 ||| |||| ||||| |||| ||||| | || ||||||| || |||| || | || Sbjct 58178 TAGGTGTACTTGAAA--TCTCTGTCGTACACGATGGCCGAGTTCAGCGTATCTTTGTTTT 58121 Query 66709 TGTTAACTACATCCATGGTAATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTT 66763 | || | || || | |||| ||||| || || | ||| ||||| | Sbjct 58120 CCATGACAATAT---TG--TAGACTTCATCCGAAATCATAGGGGCATGCTTCCCCGTGGC 58066 Query 66764 AGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTT 66823 ||| ||||| ||| | || || || || || | || | ||| | || | || Sbjct 58065 AGGGTTGACCCAGTCGTGCAAGTCTTCAATGACCTTGGAGAACTGCTTTGTGGTCTGCTT 58006 Query 66824 GTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGT 66883 |||| || || | ||| ||||||||||| | |||| ||||| || || || || Sbjct 58005 ATGTAAGTTGGAGATGGCAATTCTAGCGGCCAACGTGGCGTAATCAGGGTGCACCGTGGT 57946 Query 66884 ACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 66937 || || || | | ||||| ||||| |||||| ||| || || || || || Sbjct 57945 -CATGTATGCACATGTCTCGGCAGCCAGGTTGTCCAGTTCGACGGTGGTGACACC 57892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658169122459480