Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242675.1_202017-08-07]
447 sequences; 12,513,392 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq35 300 2e-76
seq57 217 2e-51
>seq35
Length=195003
Score = 300 bits (332), Expect = 2e-76
Identities = 1331/2078 (64%), Gaps = 57/2078 (3%)
Strand=Plus/Minus
Query 64835 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893
||||| | |||||||| | ||| || |||| || || | | ||| ||||| || || |
Sbjct 52046 CAATGGTAAATTGAATAGCAGCAGAAGCGGCTTGTGTTCTCAAATAATACATACCGGTCT 51987
Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCT 64952
||||||| |||| ||||| ||||||||||| ||||| || || | ||
Sbjct 51986 TTAGACCTTTCTTCCAACCGTAGAAATGCATACTTGTTAGCTTACCCATGGTTGGGGCAC 51927
Query 64953 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 65012
|| | | | ||||| ||| || |||||||||| | | | | ||| || |||||
Sbjct 51926 GCAAGAATAA-ATTCAAAGAATGGGATTGATCGATGTAAACGGCACGGTCGGCTGCCATG 51868
Query 65013 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTC 65071
|| ||||| |||||||||| ||||||||||| ||| ||||| || || | ||| ||||
Sbjct 51867 TTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTATACAAATCTTTCAAT-TCTTG 51809
Query 65072 TGGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATT-CTTGATCT 65127
||| | ||||| || | |||||||| ||| | || || | |||| ||| ||
Sbjct 51808 TGGTACGTTTGGTAAACCTTGAATGGAACCATTTTGTGTGATTAGA-TATTGCTTCATAC 51750
Query 65128 CATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186
|||||| ||| ||| | || ||| | | || | | ||||| || ||||||
Sbjct 51749 CATCATCCCA-AATACCCAAATCAACCAAATCACGCAGTAAGTATGGATTGACGACTTGA 51691
Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246
||||| ||||| | || | |||| ||| || || ||| ||||| | | ||||
Sbjct 51690 AATTCACCAGATAGAACACGACGAGAGTACATGTTGGAAGTAACTGGTTCGAAACACTCG 51631
Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306
|| | || ||||| || | ||| |||||||| ||||||||||||| ||| |||
Sbjct 51630 TTGTAACCTAAAATCTGGGAAGTGGATGCAGTAGGCATAGGTGCCATGGTCAAAGAGTTT 51571
Query 65307 CTAAGACCGTATG-TTC-TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 65364
|||| ||| ||| ||| |||| | || | | | || ||||||| ||| | | | | |
Sbjct 51570 CTAACACC--ATGCTTCATGATGTCATTTCTCAAAGTATCCCAATCCCACATACCGTAAG 51513
Query 65365 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATG 65424
|| | ||| || ||||| | | || || ||| | |
Sbjct 51512 GTTTTTCGTCCCACATGTCGAATTGAAGTATACCTTGAGAAGCTGGAGAGCCTTGGAAGG 51453
Query 65425 TATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAA 65484
| |||||||| || || | | |||||| |||||| || || | | | | | || |
Sbjct 51452 TTTCGTATGGGCCATCTCTTTGAGCTAGCTCACAAGAGGCTTCCATGGAAGCATGGTACA 51393
Query 65485 TGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTA 65544
||||||| ||||| | ||||||| ||||||| | || ||||| || |
Sbjct 51392 TGGTTTCAAAGATTTGTATATTTAGTAAGCGTGCTTCTTCGGAGTCGAATGGTAAACGCA 51333
Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604
| | || || | ||| || || ||||| ||||| | | | || || || |||||| |||
Sbjct 51332 ACAACATGAAAGTGTCAGCCAAACCTTGGACACCCAAAGCAATCGGCCTGTGTCTCATAT 51273
Query 65605 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 65664
|||| || ||||| | ||||||||| ||| || |||| || || | || |
Sbjct 51272 TAGATCTTCTTGCTTCCTCGACAGGATAATAGTTACGGTCAATAACGTTGTTTAAGTTAC 51213
Query 65665 TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC----------GC--- 65711
|| ||||| | || | || || || | | || ||
Sbjct 51212 GAGTGATAACTTTAGAAATTTCATGTAGCTTTTTGAAGTTATATGTAGAAGTTTTGCCGT 51153
Query 65712 --TCATCTATTACAA-ACATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCT 65766
||| | || ||| | ||| | ||| |||||||| |||| |||||||| || ||
Sbjct 51152 CTTCAGATGTTTCAATAAATGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAGCAGTCT 51093
Query 65767 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 65826
||| | | | | |||| | || ||| ||| | ||| ||||||| || |
Sbjct 51092 CATCTGGAGCGGAGTATTCAACAATTTCACAGCACAAGTTAGACGACTTGATAACACCCA 51033
Query 65827 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 65886
| || | ||| || || ||||||| |||||||| |||| || || || |||||||
Sbjct 51032 AGTTCTTTTGGTTGGATTTCCTGTTACAAGCATCCTTGTAAACAACAAAGGGTGTACCAG 50973
Query 65887 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGT 65946
|||| | || | ||| | || | | ||| | | | ||||| || || ||
Sbjct 50972 TTTCCGTTTGTGCTTCCAATATAGAGTACCACAATTTTTGGGCCTTGAT---AGTCTTAC 50916
Query 65947 ATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 66006
| |||| ||||||| | ||||| | ||| || ||||| || | || |
Sbjct 50915 CACGGCCTTCTTTTTCGTAACGGGTATATAGGGCTTCAAATTCGTCACCGTAG-CAGTCA 50857
Query 66007 CC-AATCCAGGAC---ATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 66062
| || || ||| || | ||| | | || | ||| |||| || | ||
Sbjct 50856 CTTAAGCCTGGAGCCGATGTA---GGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACA 50800
Query 66063 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCC 66122
|| ||||| || ||||| |||| ||| |||||| ||||||||||| | | |||
Sbjct 50799 CGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACGGATTTCT 50740
Query 66123 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCC 66182
|| || || ||||||| ||| |||| ||| | | |||||| ||||| || |||
Sbjct 50739 TCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCC 50680
Query 66183 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 66242
|| |||| || | | ||||| | ||||| || ||||| || | || | || |||
Sbjct 50679 AAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATAACGGGCAGTG 50620
Query 66243 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 66302
|| || | || | | ||| ||||| | || || || || || || || || | ||
Sbjct 50619 TTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATG 50560
Query 66303 TAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 66362
|| || |||||||||| || ||| |||||| || || || || |||| ||
Sbjct 50559 TAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAA 50500
Query 66363 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 66422
|| || || ||| || || || || ||||| || || || ||||||| |||| |
Sbjct 50499 ATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCA 50440
Query 66423 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 66482
| ||| |||||| |||||||| | || || || || ||||| || |||||
Sbjct 50439 ACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAG 50380
Query 66483 GCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATC 66541
||||| ||||| ||||| || | | || || || || | ||| | || || |
Sbjct 50379 GCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTA 50320
Query 66542 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 66601
|| | ||||| |||| ||||| | ||| | | ||| || || | |||| | | |||
Sbjct 50319 TCACCG-TGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC-AACTT 50262
Query 66602 G-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-T 66659
| ||| | | |||| ||||| || ||| |||||||||||||| || || |||| |
Sbjct 50261 GACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTAACTGTACT 50202
Query 66660 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA 66719
||||| |||| || || | |||| | ||||| ||||||||||| | || | || | |
Sbjct 50201 GAAAA-TCTCTGTCATAGACAATAGCTGAGTTTAGTTTATCCTTGTTTTCCATGACAATA 50143
Query 66720 TCCATGGTAATA-CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAG 66776
| || || | | | ||||| || |||| ||| ||| | ||| ||||| ||
Sbjct 50142 T---TGTAAACATCGTCAGAAATCATAGGAGCGGCTTTACCAGTAGCAGGGTTGACGTAT 50086
Query 66777 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGAT 66836
| | | |||||| | |||| | ||| |||| | |||| ||| |||| ||| ||
Sbjct 50085 CTATAAAGATCCTCAACAACTTTAGAAAACTGTTTCGTGGTTTGTTTATGTAAATTAGAA 50026
Query 66837 ACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874
| ||| |||||||| || | | | || ||||| || ||
Sbjct 50025 ATGGCGATTCTAGCAGCCAAAGTAGCGTAATCTGGGTG 49988
>seq57
Length=156688
Score = 217 bits (240), Expect = 2e-51
Identities = 736/1135 (65%), Gaps = 25/1135 (2%)
Strand=Plus/Minus
Query 65814 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 65873
|||||||| || | || ||||| || ||||| ||||||| ||||||||||||| |||
Sbjct 59012 TTGATGGTACCCAGGTTCTGTTGGTTGGTCTTTCTGTTACAGGCATCCTTATAAACCATG 58953
Query 65874 AATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 65933
|| || ||||| ||||| | || | || | || || | ||| || | |||||||
Sbjct 58952 AAGGGTGTACCGGTTTCTGTTTGTGCTTGCAAGATGGCGTACCATACCTTTTGAGCCTTG 58893
Query 65934 ATTATAGATTTGTATCTC--TTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGT 65991
|| | ||| || | | |||||||||||| | ||||| | |||||| || |
Sbjct 58892 AT----GGTTT-TACCACGACCTTCTCTTTCGTAACGGGTATATAGCTCTTCGAATTCTT 58838
Query 65992 CTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 66051
| |||||||| | |||||| || || || || | | || | ||| | || |
Sbjct 58837 CACCCCAAACGTCGTCCAAACCTGGGGCAGCACTTGGTGAGAATAAGGTCCAGGCCCCAT 58778
Query 66052 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGG 66111
| || | || || ||||| || ||||| |||||||| ||||| || |||||||| |
Sbjct 58777 CCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTG 58718
Query 66112 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAAT 66171
| | ||| || || || | ||||| | | ||||| || | | || || ||
Sbjct 58717 CACGAATTTCTTCCTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCAT 58658
Query 66172 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 66231
|||| || |||||| | | ||| | | || || | ||||| || || || || | ||
Sbjct 58657 GCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGT 58598
Query 66232 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGG 66291
| | || ||||| || | || | | ||| ||||| | || || || ||||| ||||
Sbjct 58597 AACGTGCAGTGTTGTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGG 58538
Query 66292 TCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAAT-TGATAGACCTATTCCCCCT 66350
| || | ||||| || | | ||||||||| | || ||| ||||| | || |||
Sbjct 58537 TACCTGCAATATAAGAGCCTGTGGAACGAATATTGTTGATATGA-AGACCAACACCACCT 58479
Query 66351 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 66410
|| | || || || | || || ||| || || || || || || || || ||
Sbjct 58478 GCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCG 58419
Query 66411 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 66470
||| ||||| || || ||||| ||||||||| || | || || |||||||||
Sbjct 58418 TCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAAT 58359
Query 66471 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 66530
| || || |||||||| || || || | || | | ||||| |||| | |
Sbjct 58358 AGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTTCAGCACG 58299
Query 66531 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 66590
|| || ||||| | ||||| |||| || |||||||| | || || || || | |
Sbjct 58298 GACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCATGACCAAATGTTGGGGACGT 58239
Query 66591 TCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 66650
|| | | | || || | | | || |||||| ||||| ||| ||||| ||||||
Sbjct 58238 TCGGCCACTTCACCGTCTAGTCTTAGCAGGTAGGAACGTTCCAGAGTCTTAAACCCAAAA 58179
Query 66651 TAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATT 66708
||| |||| ||||| |||| ||||| | || ||||||| || |||| || | ||
Sbjct 58178 TAGGTGTACTTGAAA--TCTCTGTCGTACACGATGGCCGAGTTCAGCGTATCTTTGTTTT 58121
Query 66709 TGTTAACTACATCCATGGTAATACTT-----GAAATAATCGGAGAATGTTTCCCATTTTT 66763
| || | || || | |||| ||||| || || | ||| ||||| |
Sbjct 58120 CCATGACAATAT---TG--TAGACTTCATCCGAAATCATAGGGGCATGCTTCCCCGTGGC 58066
Query 66764 AGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTT 66823
||| ||||| ||| | || || || || || | || | ||| | || | ||
Sbjct 58065 AGGGTTGACCCAGTCGTGCAAGTCTTCAATGACCTTGGAGAACTGCTTTGTGGTCTGCTT 58006
Query 66824 GTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGT 66883
|||| || || | ||| ||||||||||| | |||| ||||| || || || ||
Sbjct 58005 ATGTAAGTTGGAGATGGCAATTCTAGCGGCCAACGTGGCGTAATCAGGGTGCACCGTGGT 57946
Query 66884 ACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCC 66937
|| || || | | ||||| ||||| |||||| ||| || || || || ||
Sbjct 57945 -CATGTATGCACATGTCTCGGCAGCCAGGTTGTCCAGTTCGACGGTGGTGACACC 57892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658169122459480
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